Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.07□□□□□ -1.6
NKX6-1P78426 OR2AO1P-201ENST00000476497 403 ntBASIC5.07□□□□□ -1.6
NKX6-1P78426 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX6-1P78426 NENFP3-201ENST00000503735 313 ntBASIC5.07□□□□□ -1.6
NKX6-1P78426 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX6-1P78426 AC112198.1-201ENST00000505369 1220 ntBASIC5.07□□□□□ -1.6
NKX6-1P78426 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX6-1P78426 RNY4P37-201ENST00000516225 96 ntBASIC5.07□□□□□ -1.6
NKX6-1P78426 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.07□□□□□ -1.6
NKX6-1P78426 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX6-1P78426 HMGN2P36-201ENST00000529541 409 ntBASIC5.07□□□□□ -1.6
NKX6-1P78426 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.07□□□□□ -1.6
NKX6-1P78426 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX6-1P78426 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX6-1P78426 AC009852.2-201ENST00000567898 485 ntBASIC5.07□□□□□ -1.6
NKX6-1P78426 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX6-1P78426 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX6-1P78426 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.07□□□□□ -1.6
NKX6-1P78426 AL451086.1-201ENST00000605596 223 ntBASIC5.07□□□□□ -1.6
NKX6-1P78426 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.07□□□□□ -1.6
NKX6-1P78426 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX6-1P78426 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX6-1P78426 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.07□□□□□ -1.6
NKX6-1P78426 AC099063.3-201ENST00000642066 185 ntBASIC5.07□□□□□ -1.6
NKX6-1P78426 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX6-1P78426 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.07□□□□□ -1.6
NKX6-1P78426 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX6-1P78426 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX6-1P78426 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX6-1P78426 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX6-1P78426 AC130304.1-201ENST00000622942 2385 ntBASIC5.07□□□□□ -1.6
NKX6-1P78426 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX6-1P78426 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX6-1P78426 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX6-1P78426 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NKX6-1P78426 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NKX6-1P78426 ZNF833P-201ENST00000424938 1494 ntBASIC5.07□□□□□ -1.6
NKX6-1P78426 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NKX6-1P78426 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.07□□□□□ -1.6
NKX6-1P78426 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.07□□□□□ -1.6
NKX6-1P78426 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NKX6-1P78426 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
NKX6-1P78426 AP001284.1-201ENST00000528393 2118 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX6-1P78426 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
NKX6-1P78426 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX6-1P78426 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
NKX6-1P78426 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX6-1P78426 AC022164.1-201ENST00000568767 2673 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX6-1P78426 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX6-1P78426 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX6-1P78426 RNA5SP394-201ENST00000364216 119 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NKX6-1P78426 DSTNP4-201ENST00000399472 474 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 CYCSP45-201ENST00000402289 315 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 AL078604.1-201ENST00000404609 466 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX6-1P78426 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX6-1P78426 AC073264.1-201ENST00000411508 416 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX6-1P78426 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX6-1P78426 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX6-1P78426 Z99497.1-201ENST00000421282 135 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 AC012519.1-201ENST00000424588 610 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 AL662874.1-201ENST00000426065 230 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX6-1P78426 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 VDAC1P6-201ENST00000430062 855 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 CFL1P1-202ENST00000432948 411 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX6-1P78426 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX6-1P78426 EEF1B2P6-201ENST00000445713 673 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX6-1P78426 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX6-1P78426 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX6-1P78426 RPL18AP17-201ENST00000455326 198 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 AL603882.1-201ENST00000463059 681 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX6-1P78426 RPL38P3-201ENST00000484463 213 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.06□□□□□ -1.6
NKX6-1P78426 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.06□□□□□ -1.6
NKX6-1P78426 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.06□□□□□ -1.6
NKX6-1P78426 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
NKX6-1P78426 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NKX6-1P78426 SNORA43.3-201ENST00000517240 103 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX6-1P78426 AC106038.2-201ENST00000520706 568 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 AC239860.2-201ENST00000525886 270 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX6-1P78426 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NKX6-1P78426 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.06□□□□□ -1.6
NKX6-1P78426 IGBP1P1-201ENST00000554337 1009 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 AL049872.1-201ENST00000556323 322 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.06□□□□□ -1.6
NKX6-1P78426 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.06□□□□□ -1.6
NKX6-1P78426 AC110743.1-201ENST00000584870 478 ntBASIC5.06□□□□□ -1.6
NKX6-1P78426 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.06□□□□□ -1.6
NKX6-1P78426 WISP1-OT1-201ENST00000602893 642 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms