Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNU1-83P-201ENST00000363426 164 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 RNA5SP130-201ENST00000364431 114 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 AL592291.1-201ENST00000403830 352 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 RPL21P65-201ENST00000406094 466 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 AL034374.1-201ENST00000406329 351 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 RN7SKP159-201ENST00000410657 292 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 Z74021.1-201ENST00000423610 407 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 OR2AH1P-201ENST00000425717 928 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 HMGB3P5-201ENST00000428894 612 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.93□□□□□ -1.62
CCNA1P78396 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.93□□□□□ -1.62
CCNA1P78396 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.93□□□□□ -1.62
CCNA1P78396 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.93□□□□□ -1.62
CCNA1P78396 RN7SL542P-201ENST00000467147 294 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 LARP7P4-201ENST00000481075 878 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.93□□□□□ -1.62
CCNA1P78396 SNORA67.7-201ENST00000516664 135 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 IGHV3-63-201ENST00000518422 341 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.93□□□□□ -1.62
CCNA1P78396 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.93□□□□□ -1.62
CCNA1P78396 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CCNA1P78396 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.93□□□□□ -1.62
CCNA1P78396 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.93□□□□□ -1.62
CCNA1P78396 AL354984.3-201ENST00000604803 325 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 MIR6875-201ENST00000617506 72 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.93□□□□□ -1.62
CCNA1P78396 AL445363.3-201ENST00000623080 671 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 AC145207.9-201ENST00000623802 325 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 CDRT1-208ENST00000630868 794 ntBASIC4.93□□□□□ -1.62
CCNA1P78396 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCNA1P78396 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CCNA1P78396 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCNA1P78396 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CCNA1P78396 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.93□□□□□ -1.62
CCNA1P78396 AC083843.3-201ENST00000623679 2186 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCNA1P78396 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.92□□□□□ -1.62
CCNA1P78396 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCNA1P78396 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCNA1P78396 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCNA1P78396 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCNA1P78396 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCNA1P78396 MT-TP-201ENST00000387461 68 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCNA1P78396 ATP5F1P3-201ENST00000397213 657 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 AL583835.1-201ENST00000399570 407 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 AC097374.1-203ENST00000400783 485 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 MIR921-201ENST00000401133 56 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 TRIM60P17-201ENST00000415181 719 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.92□□□□□ -1.62
CCNA1P78396 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.92□□□□□ -1.62
CCNA1P78396 AL451062.2-201ENST00000427515 271 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 AC093716.1-201ENST00000435923 377 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 CACYBPP1-201ENST00000438592 684 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.92□□□□□ -1.62
CCNA1P78396 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.92□□□□□ -1.62
CCNA1P78396 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.92□□□□□ -1.62
CCNA1P78396 AC034236.1-201ENST00000469891 373 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.92□□□□□ -1.62
CCNA1P78396 RN7SL604P-201ENST00000492589 296 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.92□□□□□ -1.62
CCNA1P78396 RNU1-45P-201ENST00000517191 141 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.92□□□□□ -1.62
CCNA1P78396 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCNA1P78396 DYNLL1P4-201ENST00000549314 266 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 AC068714.1-201ENST00000559623 800 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
CCNA1P78396 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.92□□□□□ -1.62
CCNA1P78396 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CCNA1P78396 AC114546.3-201ENST00000623582 1734 ntBASIC4.92□□□□□ -1.62
CCNA1P78396 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCNA1P78396 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
CCNA1P78396 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.91□□□□□ -1.62
CCNA1P78396 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.91□□□□□ -1.62
CCNA1P78396 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.91□□□□□ -1.62
CCNA1P78396 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCNA1P78396 RNA5SP307-201ENST00000362863 116 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 RNU6-146P-201ENST00000384602 108 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 SNORA74C-2-201ENST00000411179 201 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 OR8G2P-201ENST00000412796 908 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.91□□□□□ -1.62
CCNA1P78396 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.91□□□□□ -1.62
CCNA1P78396 RNA5SP103-201ENST00000459503 118 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.91□□□□□ -1.62
CCNA1P78396 AC022034.3-201ENST00000471393 478 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 VN1R105P-201ENST00000486595 910 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.91□□□□□ -1.62
CCNA1P78396 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.91□□□□□ -1.62
CCNA1P78396 AL352979.3-201ENST00000553515 247 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.91□□□□□ -1.62
CCNA1P78396 AC233702.9-201ENST00000581528 203 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.91□□□□□ -1.62
CCNA1P78396 AL451086.1-201ENST00000605596 223 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 RMST_5.1-201ENST00000618704 126 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.91□□□□□ -1.62
CCNA1P78396 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCNA1P78396 RLIMP1-201ENST00000339626 1680 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 AC139713.2-215ENST00000641428 5037 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms