Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH13P55290 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH13P55290 RPSAP50-201ENST00000481955 852 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AC004815.1-201ENST00000484185 331 ntBASIC4.57□□□□□ -1.68
CDH13P55290 NIP7P2-201ENST00000485801 544 ntBASIC4.57□□□□□ -1.68
CDH13P55290 GAPDHP56-201ENST00000506031 988 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH13P55290 AC119751.4-201ENST00000507498 357 ntBASIC4.57□□□□□ -1.68
CDH13P55290 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH13P55290 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH13P55290 AC110775.1-201ENST00000513721 462 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AC008562.1-201ENST00000521763 330 ntBASIC4.57□□□□□ -1.68
CDH13P55290 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.57□□□□□ -1.68
CDH13P55290 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH13P55290 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.57□□□□□ -1.68
CDH13P55290 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH13P55290 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH13P55290 AC023825.1-201ENST00000566704 1030 ntBASIC4.57□□□□□ -1.68
CDH13P55290 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.57□□□□□ -1.68
CDH13P55290 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH13P55290 AC115085.1-201ENST00000588924 229 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AC011492.1-201ENST00000600023 315 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AL391834.2-201ENST00000609982 546 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AP000894.4-201ENST00000610185 483 ntBASIC4.57□□□□□ -1.68
CDH13P55290 RNU6-1192P-201ENST00000612197 107 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AL512624.1-201ENST00000613638 469 ntBASIC4.57□□□□□ -1.68
CDH13P55290 uc_338.18-201ENST00000615451 175 ntBASIC4.57□□□□□ -1.68
CDH13P55290 RNU6-489P-201ENST00000618289 107 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AC112694.2-201ENST00000623697 768 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AC126544.2-201ENST00000625174 749 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AL031119.1-201ENST00000404707 1879 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AC046144.1-201ENST00000478559 1853 ntBASIC4.57□□□□□ -1.68
CDH13P55290 AL442639.1-201ENST00000625030 1899 ntBASIC4.57□□□□□ -1.68
CDH13P55290 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH13P55290 AL355852.1-201ENST00000454081 1771 ntBASIC4.57□□□□□ -1.68
CDH13P55290 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH13P55290 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH13P55290 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.57□□□□□ -1.68
CDH13P55290 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.57□□□□□ -1.68
CDH13P55290 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CDH13P55290 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CDH13P55290 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
CDH13P55290 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDH13P55290 AL353743.4-201ENST00000422653 1547 ntBASIC4.56□□□□□ -1.68
CDH13P55290 AC120338.1-201ENST00000625074 1541 ntBASIC4.56□□□□□ -1.68
CDH13P55290 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH13P55290 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.56□□□□□ -1.68
CDH13P55290 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH13P55290 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH13P55290 MTCO1P6-201ENST00000481192 1384 ntBASIC4.56□□□□□ -1.68
CDH13P55290 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH13P55290 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH13P55290 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH13P55290 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH13P55290 CIR1P2-201ENST00000514821 1342 ntBASIC4.56□□□□□ -1.68
CDH13P55290 OR51H2P-202ENST00000641424 3046 ntBASIC4.56□□□□□ -1.68
CDH13P55290 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDH13P55290 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH13P55290 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDH13P55290 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH13P55290 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH13P55290 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDH13P55290 RNA5SP305-201ENST00000362665 119 ntBASIC4.56□□□□□ -1.68
CDH13P55290 U6.112-201ENST00000384129 70 ntBASIC4.56□□□□□ -1.68
CDH13P55290 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CDH13P55290 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH13P55290 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH13P55290 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH13P55290 RBMY2QP-201ENST00000429799 1147 ntBASIC4.56□□□□□ -1.68
CDH13P55290 YWHAEP5-201ENST00000431545 765 ntBASIC4.56□□□□□ -1.68
CDH13P55290 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH13P55290 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH13P55290 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH13P55290 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH13P55290 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH13P55290 AL645937.3-201ENST00000453647 936 ntBASIC4.56□□□□□ -1.68
CDH13P55290 AC008280.2-201ENST00000455473 307 ntBASIC4.56□□□□□ -1.68
CDH13P55290 PPIAP21-201ENST00000464473 501 ntBASIC4.56□□□□□ -1.68
CDH13P55290 AC006511.1-201ENST00000470614 315 ntBASIC4.56□□□□□ -1.68
CDH13P55290 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH13P55290 AC008427.1-201ENST00000503102 655 ntBASIC4.56□□□□□ -1.68
CDH13P55290 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH13P55290 RNU1-6P-201ENST00000516290 144 ntBASIC4.56□□□□□ -1.68
CDH13P55290 RNA5SP360-201ENST00000516555 118 ntBASIC4.56□□□□□ -1.68
CDH13P55290 AC107918.3-201ENST00000533272 382 ntBASIC4.56□□□□□ -1.68
CDH13P55290 AC008033.2-201ENST00000542626 177 ntBASIC4.56□□□□□ -1.68
CDH13P55290 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH13P55290 NTAN1P1-201ENST00000603150 646 ntBASIC4.56□□□□□ -1.68
CDH13P55290 OR7A19P-201ENST00000608051 733 ntBASIC4.56□□□□□ -1.68
CDH13P55290 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH13P55290 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH13P55290 HSPD1P14-201ENST00000432666 1618 ntBASIC4.56□□□□□ -1.68
CDH13P55290 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH13P55290 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
CDH13P55290 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH13P55290 AC090971.4-201ENST00000560291 1800 ntBASIC4.56□□□□□ -1.68
CDH13P55290 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH13P55290 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH13P55290 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH13P55290 USP9YP4-201ENST00000424401 1745 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms