Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH11P55287 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH11P55287 DUXAP8-207ENST00000456786 622 ntBASIC4.37□□□□□ -1.71
CDH11P55287 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.37□□□□□ -1.71
CDH11P55287 AC092324.1-201ENST00000468671 324 ntBASIC4.37□□□□□ -1.71
CDH11P55287 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH11P55287 RPL7P16-201ENST00000479738 738 ntBASIC4.37□□□□□ -1.71
CDH11P55287 RN7SL319P-201ENST00000480656 221 ntBASIC4.37□□□□□ -1.71
CDH11P55287 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH11P55287 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH11P55287 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH11P55287 TCP11X3P-202ENST00000514289 1254 ntBASIC4.37□□□□□ -1.71
CDH11P55287 RPS27AP18-201ENST00000515536 459 ntBASIC4.37□□□□□ -1.71
CDH11P55287 RNU6-709P-201ENST00000517257 104 ntBASIC4.37□□□□□ -1.71
CDH11P55287 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH11P55287 OR8I1P-201ENST00000529291 931 ntBASIC4.37□□□□□ -1.71
CDH11P55287 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.37□□□□□ -1.71
CDH11P55287 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH11P55287 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.37□□□□□ -1.71
CDH11P55287 MTND1P24-201ENST00000552175 861 ntBASIC4.37□□□□□ -1.71
CDH11P55287 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH11P55287 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH11P55287 TVP23CP2-201ENST00000571473 623 ntBASIC4.37□□□□□ -1.71
CDH11P55287 MIR548Y-201ENST00000582739 110 ntBASIC4.37□□□□□ -1.71
CDH11P55287 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH11P55287 AC104785.1-201ENST00000603220 588 ntBASIC4.37□□□□□ -1.71
CDH11P55287 DUXAP10-204ENST00000612052 616 ntBASIC4.37□□□□□ -1.71
CDH11P55287 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH11P55287 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH11P55287 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH11P55287 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH11P55287 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 AC108751.5-201ENST00000492880 1336 ntBASIC4.37□□□□□ -1.71
CDH11P55287 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
CDH11P55287 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDH11P55287 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CDH11P55287 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH11P55287 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH11P55287 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH11P55287 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH11P55287 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH11P55287 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CDH11P55287 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH11P55287 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH11P55287 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH11P55287 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH11P55287 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CDH11P55287 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDH11P55287 RN7SKP149-201ENST00000363008 344 ntBASIC4.36□□□□□ -1.71
CDH11P55287 U6.112-201ENST00000384129 70 ntBASIC4.36□□□□□ -1.71
CDH11P55287 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDH11P55287 SNORA68.2-201ENST00000391263 128 ntBASIC4.36□□□□□ -1.71
CDH11P55287 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH11P55287 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.36□□□□□ -1.71
CDH11P55287 ZNF602P-201ENST00000405929 924 ntBASIC4.36□□□□□ -1.71
CDH11P55287 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH11P55287 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH11P55287 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH11P55287 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.36□□□□□ -1.71
CDH11P55287 AL049745.1-201ENST00000433953 286 ntBASIC4.36□□□□□ -1.71
CDH11P55287 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH11P55287 ARL4AP3-201ENST00000441452 574 ntBASIC4.36□□□□□ -1.71
CDH11P55287 AC112498.1-201ENST00000444401 332 ntBASIC4.36□□□□□ -1.71
CDH11P55287 ARL5AP2-201ENST00000444698 533 ntBASIC4.36□□□□□ -1.71
CDH11P55287 AC000111.2-201ENST00000448200 210 ntBASIC4.36□□□□□ -1.71
CDH11P55287 EXOSC3P1-201ENST00000448649 500 ntBASIC4.36□□□□□ -1.71
CDH11P55287 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.36□□□□□ -1.71
CDH11P55287 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH11P55287 RPL23AP37-201ENST00000479658 549 ntBASIC4.36□□□□□ -1.71
CDH11P55287 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CDH11P55287 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH11P55287 RNA5SP228-201ENST00000516232 133 ntBASIC4.36□□□□□ -1.71
CDH11P55287 RNA5SP43-201ENST00000516559 110 ntBASIC4.36□□□□□ -1.71
CDH11P55287 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH11P55287 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH11P55287 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH11P55287 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.36□□□□□ -1.71
CDH11P55287 AC021006.3-201ENST00000530771 192 ntBASIC4.36□□□□□ -1.71
CDH11P55287 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH11P55287 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH11P55287 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH11P55287 AC008033.2-201ENST00000542626 177 ntBASIC4.36□□□□□ -1.71
CDH11P55287 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH11P55287 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH11P55287 MIR4509-3-201ENST00000578671 94 ntBASIC4.36□□□□□ -1.71
CDH11P55287 MIR4509-2-201ENST00000583920 94 ntBASIC4.36□□□□□ -1.71
CDH11P55287 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH11P55287 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.36□□□□□ -1.71
CDH11P55287 BNIP3P38-201ENST00000601117 544 ntBASIC4.36□□□□□ -1.71
CDH11P55287 AL137072.1-201ENST00000603444 466 ntBASIC4.36□□□□□ -1.71
CDH11P55287 RPP40P2-201ENST00000603596 712 ntBASIC4.36□□□□□ -1.71
CDH11P55287 AL031320.1-201ENST00000604177 357 ntBASIC4.36□□□□□ -1.71
CDH11P55287 COX6CP4-201ENST00000605798 228 ntBASIC4.36□□□□□ -1.71
CDH11P55287 MIR6748-201ENST00000610433 71 ntBASIC4.36□□□□□ -1.71
CDH11P55287 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH11P55287 AC008147.4-201ENST00000617570 1204 ntBASIC4.36□□□□□ -1.71
CDH11P55287 MIR4509-1-201ENST00000618224 94 ntBASIC4.36□□□□□ -1.71
CDH11P55287 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH11P55287 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms