Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC016877.3-201ENST00000606778 504 ntBASIC6.08□□□□□ -1.44
MRE11P49959 SNORD91B-202ENST00000608459 222 ntBASIC6.08□□□□□ -1.44
MRE11P49959 FAM25E-202ENST00000608562 189 ntBASIC6.08□□□□□ -1.44
MRE11P49959 AP000255.1-201ENST00000610276 676 ntBASIC6.08□□□□□ -1.44
MRE11P49959 AC073530.2-201ENST00000623987 261 ntBASIC6.08□□□□□ -1.44
MRE11P49959 AC007490.1-201ENST00000624321 703 ntBASIC6.08□□□□□ -1.44
MRE11P49959 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
MRE11P49959 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.08□□□□□ -1.44
MRE11P49959 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
MRE11P49959 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.08□□□□□ -1.44
MRE11P49959 AC026523.2-201ENST00000625039 7739 ntBASIC6.08□□□□□ -1.44
MRE11P49959 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
MRE11P49959 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MRE11P49959 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.07□□□□□ -1.44
MRE11P49959 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
MRE11P49959 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
MRE11P49959 RPL23P2-201ENST00000320371 421 ntBASIC6.07□□□□□ -1.44
MRE11P49959 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
MRE11P49959 RNU6-932P-201ENST00000391108 106 ntBASIC6.07□□□□□ -1.44
MRE11P49959 DBIP1-201ENST00000401435 260 ntBASIC6.07□□□□□ -1.44
MRE11P49959 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.07□□□□□ -1.44
MRE11P49959 Y_RNA.619-201ENST00000410951 90 ntBASIC6.07□□□□□ -1.44
MRE11P49959 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.07□□□□□ -1.44
MRE11P49959 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.07□□□□□ -1.44
MRE11P49959 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.07□□□□□ -1.44
MRE11P49959 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.07□□□□□ -1.44
MRE11P49959 RPL34P26-201ENST00000445636 354 ntBASIC6.07□□□□□ -1.44
MRE11P49959 BX842559.2-201ENST00000451418 605 ntBASIC6.07□□□□□ -1.44
MRE11P49959 CYCSP34-201ENST00000458172 304 ntBASIC6.07□□□□□ -1.44
MRE11P49959 AC092754.2-201ENST00000463506 460 ntBASIC6.07□□□□□ -1.44
MRE11P49959 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.07□□□□□ -1.44
MRE11P49959 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.07□□□□□ -1.44
MRE11P49959 MTND3P7-201ENST00000474435 343 ntBASIC6.07□□□□□ -1.44
MRE11P49959 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.07□□□□□ -1.44
MRE11P49959 NENFP3-201ENST00000503735 313 ntBASIC6.07□□□□□ -1.44
MRE11P49959 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.07□□□□□ -1.44
MRE11P49959 AC010625.1-201ENST00000511296 403 ntBASIC6.07□□□□□ -1.44
MRE11P49959 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC6.07□□□□□ -1.44
MRE11P49959 HMGB1P19-201ENST00000517578 577 ntBASIC6.07□□□□□ -1.44
MRE11P49959 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.07□□□□□ -1.44
MRE11P49959 MTCO1P49-201ENST00000523429 802 ntBASIC6.07□□□□□ -1.44
MRE11P49959 IGLV3-30-201ENST00000524362 298 ntBASIC6.07□□□□□ -1.44
MRE11P49959 AP001804.2-201ENST00000533932 910 ntBASIC6.07□□□□□ -1.44
MRE11P49959 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.07□□□□□ -1.44
MRE11P49959 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.07□□□□□ -1.44
MRE11P49959 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MRE11P49959 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.07□□□□□ -1.44
MRE11P49959 AC015688.2-201ENST00000584523 262 ntBASIC6.07□□□□□ -1.44
MRE11P49959 AC004492.1-201ENST00000607036 742 ntBASIC6.07□□□□□ -1.44
MRE11P49959 AL451049.1-201ENST00000608672 497 ntBASIC6.07□□□□□ -1.44
MRE11P49959 AL445423.1-201ENST00000609941 536 ntBASIC6.07□□□□□ -1.44
MRE11P49959 AL354976.1-201ENST00000613843 387 ntBASIC6.07□□□□□ -1.44
MRE11P49959 AC022306.2-201ENST00000617563 647 ntBASIC6.07□□□□□ -1.44
MRE11P49959 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MRE11P49959 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
MRE11P49959 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.07□□□□□ -1.44
MRE11P49959 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.07□□□□□ -1.44
MRE11P49959 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.07□□□□□ -1.44
MRE11P49959 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.07□□□□□ -1.44
MRE11P49959 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC6.07□□□□□ -1.44
MRE11P49959 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
MRE11P49959 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
MRE11P49959 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.06□□□□□ -1.44
MRE11P49959 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 AC063976.2-201ENST00000425667 3556 ntBASIC6.06□□□□□ -1.44
MRE11P49959 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 ZNF542P-204ENST00000482727 1305 ntBASIC6.06□□□□□ -1.44
MRE11P49959 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
MRE11P49959 MTCO1P56-201ENST00000401674 224 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.06□□□□□ -1.44
MRE11P49959 RPS7P9-201ENST00000414704 586 ntBASIC6.06□□□□□ -1.44
MRE11P49959 BTF3P9-201ENST00000418784 283 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.06□□□□□ -1.44
MRE11P49959 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.06□□□□□ -1.44
MRE11P49959 MTND4P20-201ENST00000424125 869 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AC126120.1-201ENST00000431082 470 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AC005189.1-201ENST00000431286 310 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.06□□□□□ -1.44
MRE11P49959 ISCA1P2-201ENST00000438679 421 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AC092393.1-201ENST00000439625 742 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.06□□□□□ -1.44
MRE11P49959 GTF2IP12-201ENST00000456547 356 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AL133477.1-201ENST00000457472 514 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AP000942.1-201ENST00000463969 747 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AC100832.1-201ENST00000471945 383 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AC090686.1-201ENST00000481577 749 ntBASIC6.06□□□□□ -1.44
MRE11P49959 RPL7P41-201ENST00000485823 957 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.06□□□□□ -1.44
MRE11P49959 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.06□□□□□ -1.44
MRE11P49959 AC091860.1-201ENST00000505723 432 ntBASIC6.06□□□□□ -1.44
MRE11P49959 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.06□□□□□ -1.44
MRE11P49959 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.06□□□□□ -1.44
MRE11P49959 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.06□□□□□ -1.44
MRE11P49959 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.06□□□□□ -1.44
MRE11P49959 OR5AZ1P-201ENST00000527448 943 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms