Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LHX1P48742 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LHX1P48742 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LHX1P48742 RNU1-63P-201ENST00000383902 164 ntBASIC4.72□□□□□ -1.65
LHX1P48742 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LHX1P48742 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LHX1P48742 SNORA11F-201ENST00000408237 128 ntBASIC4.72□□□□□ -1.65
LHX1P48742 RNU4-25P-201ENST00000410569 230 ntBASIC4.72□□□□□ -1.65
LHX1P48742 RAB28P1-201ENST00000411517 641 ntBASIC4.72□□□□□ -1.65
LHX1P48742 SNRPFP1-201ENST00000414761 252 ntBASIC4.72□□□□□ -1.65
LHX1P48742 AL606495.1-201ENST00000422100 813 ntBASIC4.72□□□□□ -1.65
LHX1P48742 VN1R42P-201ENST00000424651 344 ntBASIC4.72□□□□□ -1.65
LHX1P48742 NIPA2P1-201ENST00000426223 976 ntBASIC4.72□□□□□ -1.65
LHX1P48742 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.72□□□□□ -1.65
LHX1P48742 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.72□□□□□ -1.65
LHX1P48742 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.72□□□□□ -1.65
LHX1P48742 AL132765.1-201ENST00000434165 553 ntBASIC4.72□□□□□ -1.65
LHX1P48742 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.72□□□□□ -1.65
LHX1P48742 CBX1P1-201ENST00000440184 427 ntBASIC4.72□□□□□ -1.65
LHX1P48742 AC114495.1-201ENST00000441274 436 ntBASIC4.72□□□□□ -1.65
LHX1P48742 CASP3P1-201ENST00000446037 609 ntBASIC4.72□□□□□ -1.65
LHX1P48742 AC069540.1-201ENST00000446320 988 ntBASIC4.72□□□□□ -1.65
LHX1P48742 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.72□□□□□ -1.65
LHX1P48742 TPT1P12-201ENST00000448968 492 ntBASIC4.72□□□□□ -1.65
LHX1P48742 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.72□□□□□ -1.65
LHX1P48742 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.72□□□□□ -1.65
LHX1P48742 RPL7P32-201ENST00000457119 744 ntBASIC4.72□□□□□ -1.65
LHX1P48742 RN7SL303P-201ENST00000469773 251 ntBASIC4.72□□□□□ -1.65
LHX1P48742 RPL23AP65-201ENST00000475608 468 ntBASIC4.72□□□□□ -1.65
LHX1P48742 RN7SL812P-201ENST00000493791 279 ntBASIC4.72□□□□□ -1.65
LHX1P48742 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.72□□□□□ -1.65
LHX1P48742 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LHX1P48742 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.72□□□□□ -1.65
LHX1P48742 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.72□□□□□ -1.65
LHX1P48742 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.72□□□□□ -1.65
LHX1P48742 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.72□□□□□ -1.65
LHX1P48742 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LHX1P48742 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.72□□□□□ -1.65
LHX1P48742 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.72□□□□□ -1.65
LHX1P48742 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.72□□□□□ -1.65
LHX1P48742 AC022884.3-201ENST00000579571 248 ntBASIC4.72□□□□□ -1.65
LHX1P48742 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.72□□□□□ -1.65
LHX1P48742 MTATP6P2-201ENST00000603319 678 ntBASIC4.72□□□□□ -1.65
LHX1P48742 MIR8084-201ENST00000614105 89 ntBASIC4.72□□□□□ -1.65
LHX1P48742 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.72□□□□□ -1.65
LHX1P48742 AC015871.5-202ENST00000623252 701 ntBASIC4.72□□□□□ -1.65
LHX1P48742 AC007342.8-201ENST00000623278 678 ntBASIC4.72□□□□□ -1.65
LHX1P48742 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LHX1P48742 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.72□□□□□ -1.65
LHX1P48742 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.72□□□□□ -1.65
LHX1P48742 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LHX1P48742 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LHX1P48742 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LHX1P48742 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LHX1P48742 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.72□□□□□ -1.65
LHX1P48742 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.71□□□□□ -1.66
LHX1P48742 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
LHX1P48742 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.71□□□□□ -1.66
LHX1P48742 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.71□□□□□ -1.66
LHX1P48742 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LHX1P48742 AL672167.1-205ENST00000641112 3080 ntBASIC4.71□□□□□ -1.66
LHX1P48742 AC008033.1-201ENST00000216407 1162 ntBASIC4.71□□□□□ -1.66
LHX1P48742 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LHX1P48742 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LHX1P48742 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LHX1P48742 SNORA63.3-201ENST00000362682 132 ntBASIC4.71□□□□□ -1.66
LHX1P48742 MIR142-201ENST00000384835 87 ntBASIC4.71□□□□□ -1.66
LHX1P48742 RNU6-796P-201ENST00000391086 107 ntBASIC4.71□□□□□ -1.66
LHX1P48742 HMGB1P13-201ENST00000406019 642 ntBASIC4.71□□□□□ -1.66
LHX1P48742 AL158050.1-201ENST00000416077 457 ntBASIC4.71□□□□□ -1.66
LHX1P48742 CHIAP3-201ENST00000423668 1133 ntBASIC4.71□□□□□ -1.66
LHX1P48742 MTCO2P1-201ENST00000424648 477 ntBASIC4.71□□□□□ -1.66
LHX1P48742 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.71□□□□□ -1.66
LHX1P48742 FO393419.3-201ENST00000428741 282 ntBASIC4.71□□□□□ -1.66
LHX1P48742 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.71□□□□□ -1.66
LHX1P48742 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.71□□□□□ -1.66
LHX1P48742 FHP1-201ENST00000442741 703 ntBASIC4.71□□□□□ -1.66
LHX1P48742 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.71□□□□□ -1.66
LHX1P48742 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.71□□□□□ -1.66
LHX1P48742 RPL7P48-201ENST00000461513 746 ntBASIC4.71□□□□□ -1.66
LHX1P48742 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.71□□□□□ -1.66
LHX1P48742 RPS27AP16-201ENST00000492222 470 ntBASIC4.71□□□□□ -1.66
LHX1P48742 RPS4XP18-201ENST00000495480 763 ntBASIC4.71□□□□□ -1.66
LHX1P48742 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.71□□□□□ -1.66
LHX1P48742 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.71□□□□□ -1.66
LHX1P48742 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.71□□□□□ -1.66
LHX1P48742 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.71□□□□□ -1.66
LHX1P48742 RNU6-334P-201ENST00000517072 102 ntBASIC4.71□□□□□ -1.66
LHX1P48742 IGKV2D-10-201ENST00000520194 281 ntBASIC4.71□□□□□ -1.66
LHX1P48742 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.71□□□□□ -1.66
LHX1P48742 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LHX1P48742 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
LHX1P48742 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.71□□□□□ -1.66
LHX1P48742 SULT1C2P2-201ENST00000562517 294 ntBASIC4.71□□□□□ -1.66
LHX1P48742 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.71□□□□□ -1.66
LHX1P48742 RPL7P50-201ENST00000600588 727 ntBASIC4.71□□□□□ -1.66
LHX1P48742 AC113403.1-201ENST00000604910 193 ntBASIC4.71□□□□□ -1.66
LHX1P48742 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.71□□□□□ -1.66
LHX1P48742 AP002360.3-201ENST00000607673 710 ntBASIC4.71□□□□□ -1.66
LHX1P48742 AL445423.1-201ENST00000609941 536 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms