Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NEDD4P46934 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.9□□□□□ -1.62
NEDD4P46934 AC092111.2-201ENST00000611627 1414 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 RNA5SP130-201ENST00000364431 114 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 SNORA70C-201ENST00000384538 135 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NEDD4P46934 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.9□□□□□ -1.63
NEDD4P46934 AC013470.3-201ENST00000420252 1194 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NEDD4P46934 AL138787.1-202ENST00000437804 898 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NEDD4P46934 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.9□□□□□ -1.63
NEDD4P46934 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.9□□□□□ -1.63
NEDD4P46934 AP000942.1-201ENST00000463969 747 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NEDD4P46934 AC025554.1-201ENST00000505641 188 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 COL6A4P2-205ENST00000509855 506 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 AC006499.6-201ENST00000511169 607 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.9□□□□□ -1.63
NEDD4P46934 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.9□□□□□ -1.63
NEDD4P46934 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.9□□□□□ -1.63
NEDD4P46934 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.9□□□□□ -1.63
NEDD4P46934 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
NEDD4P46934 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.9□□□□□ -1.63
NEDD4P46934 AC063950.1-201ENST00000552036 308 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.9□□□□□ -1.63
NEDD4P46934 CYP4A43P-201ENST00000568156 121 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.9□□□□□ -1.63
NEDD4P46934 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.9□□□□□ -1.63
NEDD4P46934 AC114878.2-201ENST00000604863 1251 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 MIR432-201ENST00000606207 94 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 RNU6-84P-201ENST00000607737 102 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 AC006213.5-201ENST00000619673 288 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 AL162233.1-201ENST00000620014 944 ntBASIC4.9□□□□□ -1.63
NEDD4P46934 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEDD4P46934 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NEDD4P46934 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.9□□□□□ -1.63
NEDD4P46934 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.89□□□□□ -1.63
NEDD4P46934 SCN1A-220ENST00000641603 12506 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NEDD4P46934 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.89□□□□□ -1.63
NEDD4P46934 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NEDD4P46934 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NEDD4P46934 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
NEDD4P46934 RHOT1P2-201ENST00000366423 333 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 MIR513A2-201ENST00000385249 127 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 AL022722.2-201ENST00000402519 180 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.89□□□□□ -1.63
NEDD4P46934 AC004975.1-201ENST00000428733 208 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.89□□□□□ -1.63
NEDD4P46934 MRPS33P4-201ENST00000434892 317 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 RPL23AP89-201ENST00000439324 255 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 ARL5AP3-201ENST00000439327 386 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NEDD4P46934 MTND6P5-201ENST00000448266 512 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 RN7SL604P-201ENST00000492589 296 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 PRELID3BP5-201ENST00000508612 460 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.89□□□□□ -1.63
NEDD4P46934 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.89□□□□□ -1.63
NEDD4P46934 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.89□□□□□ -1.63
NEDD4P46934 AL121839.1-201ENST00000556233 1185 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 AL390334.1-201ENST00000556395 450 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 PARP1P2-201ENST00000556806 195 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.89□□□□□ -1.63
NEDD4P46934 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.89□□□□□ -1.63
NEDD4P46934 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.89□□□□□ -1.63
NEDD4P46934 AC020910.2-201ENST00000603635 610 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 AL139395.1-201ENST00000603662 160 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 AC073111.2-201ENST00000605657 1075 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 MIR6867-201ENST00000610636 67 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.89□□□□□ -1.63
NEDD4P46934 MIR492-201ENST00000638676 116 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.89□□□□□ -1.63
NEDD4P46934 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NEDD4P46934 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NEDD4P46934 NEAT1-202ENST00000501122 22743 ntBASIC4.89□□□□□ -1.63
NEDD4P46934 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
NEDD4P46934 AC092162.3-201ENST00000624511 1624 ntBASIC4.88□□□□□ -1.63
NEDD4P46934 AC016588.2-201ENST00000632484 3021 ntBASIC4.88□□□□□ -1.63
NEDD4P46934 LINC01355-201ENST00000566551 5444 ntBASIC4.88□□□□□ -1.63
NEDD4P46934 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NEDD4P46934 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NEDD4P46934 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NEDD4P46934 RNU1-13P-201ENST00000384499 162 ntBASIC4.88□□□□□ -1.63
NEDD4P46934 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NEDD4P46934 AP000357.1-201ENST00000409926 1165 ntBASIC4.88□□□□□ -1.63
NEDD4P46934 TPT1P2-201ENST00000413105 503 ntBASIC4.88□□□□□ -1.63
NEDD4P46934 AL356095.1-201ENST00000417217 199 ntBASIC4.88□□□□□ -1.63
NEDD4P46934 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.88□□□□□ -1.63
NEDD4P46934 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.88□□□□□ -1.63
NEDD4P46934 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NEDD4P46934 OR4C10P-201ENST00000434991 931 ntBASIC4.88□□□□□ -1.63
NEDD4P46934 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.88□□□□□ -1.63
NEDD4P46934 AC105918.1-201ENST00000474399 838 ntBASIC4.88□□□□□ -1.63
NEDD4P46934 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.88□□□□□ -1.63
NEDD4P46934 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.88□□□□□ -1.63
NEDD4P46934 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.88□□□□□ -1.63
NEDD4P46934 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.88□□□□□ -1.63
NEDD4P46934 AC090506.2-201ENST00000624521 419 ntBASIC4.88□□□□□ -1.63
NEDD4P46934 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms