Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
SCN4AP35499 MIR921-201ENST00000401133 56 ntBASIC4.88□□□□□ -1.63
SCN4AP35499 MIR1179-201ENST00000408703 91 ntBASIC4.88□□□□□ -1.63
SCN4AP35499 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN4AP35499 NPM1P34-201ENST00000428821 893 ntBASIC4.88□□□□□ -1.63
SCN4AP35499 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN4AP35499 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN4AP35499 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN4AP35499 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN4AP35499 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN4AP35499 CYCSP30-201ENST00000546447 172 ntBASIC4.88□□□□□ -1.63
SCN4AP35499 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN4AP35499 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN4AP35499 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SCN4AP35499 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SCN4AP35499 AL133268.1-201ENST00000405676 1401 ntBASIC4.88□□□□□ -1.63
SCN4AP35499 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN4AP35499 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4AP35499 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SCN4AP35499 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SCN4AP35499 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SCN4AP35499 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4AP35499 SNORA60-201ENST00000362396 134 ntBASIC4.88□□□□□ -1.63
SCN4AP35499 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN4AP35499 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN4AP35499 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4AP35499 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN4AP35499 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN4AP35499 AC008155.2-201ENST00000464337 397 ntBASIC4.88□□□□□ -1.63
SCN4AP35499 AC090589.1-201ENST00000473109 362 ntBASIC4.88□□□□□ -1.63
SCN4AP35499 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN4AP35499 AL352979.3-201ENST00000553515 247 ntBASIC4.88□□□□□ -1.63
SCN4AP35499 GTF2IP8-201ENST00000560687 584 ntBASIC4.88□□□□□ -1.63
SCN4AP35499 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN4AP35499 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN4AP35499 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4AP35499 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4AP35499 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN4AP35499 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SCN4AP35499 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN4AP35499 AC083843.3-201ENST00000623679 2186 ntBASIC4.87□□□□□ -1.63
SCN4AP35499 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4AP35499 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4AP35499 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SCN4AP35499 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SCN4AP35499 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
SCN4AP35499 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.87□□□□□ -1.63
SCN4AP35499 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4AP35499 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SCN4AP35499 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4AP35499 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN4AP35499 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4AP35499 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN4AP35499 AC073587.1-201ENST00000447093 876 ntBASIC4.87□□□□□ -1.63
SCN4AP35499 PPIAP15-201ENST00000479662 484 ntBASIC4.87□□□□□ -1.63
SCN4AP35499 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.87□□□□□ -1.63
SCN4AP35499 AC106707.2-201ENST00000484182 374 ntBASIC4.87□□□□□ -1.63
SCN4AP35499 UBE2CP3-201ENST00000502715 450 ntBASIC4.87□□□□□ -1.63
SCN4AP35499 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.87□□□□□ -1.63
SCN4AP35499 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.87□□□□□ -1.63
SCN4AP35499 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.87□□□□□ -1.63
SCN4AP35499 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SCN4AP35499 AC008966.2-201ENST00000606157 453 ntBASIC4.87□□□□□ -1.63
SCN4AP35499 AC243654.2-201ENST00000612843 443 ntBASIC4.87□□□□□ -1.63
SCN4AP35499 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
SCN4AP35499 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.87□□□□□ -1.63
SCN4AP35499 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN4AP35499 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN4AP35499 RNA5SP146-201ENST00000410743 123 ntBASIC4.86□□□□□ -1.63
SCN4AP35499 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN4AP35499 AL139247.1-201ENST00000422768 325 ntBASIC4.86□□□□□ -1.63
SCN4AP35499 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.86□□□□□ -1.63
SCN4AP35499 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN4AP35499 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN4AP35499 HSPD1P15-201ENST00000505573 1122 ntBASIC4.86□□□□□ -1.63
SCN4AP35499 AC005344.1-201ENST00000613391 459 ntBASIC4.86□□□□□ -1.63
SCN4AP35499 AC091905.2-201ENST00000623143 306 ntBASIC4.86□□□□□ -1.63
SCN4AP35499 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN4AP35499 DDX18P4-201ENST00000511690 1966 ntBASIC4.86□□□□□ -1.63
SCN4AP35499 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SCN4AP35499 AC021242.1-201ENST00000507315 2035 ntBASIC4.86□□□□□ -1.63
SCN4AP35499 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.86□□□□□ -1.63
SCN4AP35499 AC074029.4-201ENST00000624796 1859 ntBASIC4.86□□□□□ -1.63
SCN4AP35499 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN4AP35499 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN4AP35499 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
SCN4AP35499 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN4AP35499 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN4AP35499 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN4AP35499 OR52E6-202ENST00000379946 954 ntBASIC4.86□□□□□ -1.63
SCN4AP35499 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN4AP35499 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN4AP35499 AC015726.1-201ENST00000602353 681 ntBASIC4.86□□□□□ -1.63
SCN4AP35499 AC024023.1-201ENST00000624530 922 ntBASIC4.86□□□□□ -1.63
SCN4AP35499 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SCN4AP35499 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SCN4AP35499 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN4AP35499 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SCN4AP35499 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
SCN4AP35499 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms