Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXD12P35452 AC004022.1-201ENST00000447766 1066 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 MRPL35P2-201ENST00000448009 511 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXD12P35452 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXD12P35452 snoU13.20-201ENST00000459180 104 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 NIP7P2-201ENST00000485801 544 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 HMGN2P25-201ENST00000486956 268 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD12P35452 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXD12P35452 RNA5SP464-201ENST00000516251 108 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXD12P35452 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXD12P35452 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXD12P35452 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXD12P35452 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXD12P35452 AC079075.1-201ENST00000559543 878 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 AC009117.1-201ENST00000563948 554 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXD12P35452 AC145350.1-201ENST00000567426 208 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 MTND3P13-201ENST00000574391 343 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXD12P35452 PCNAP1-202ENST00000595299 752 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD12P35452 AC009027.1-201ENST00000604510 479 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 AC114878.2-201ENST00000604863 1251 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 AL121890.3-201ENST00000618494 516 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 AC123767.1-202ENST00000620407 817 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 uc_338.7-201ENST00000621834 124 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 AC090897.3-201ENST00000636973 1157 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 AC073869.8-201ENST00000641806 335 ntBASIC5.19□□□□□ -1.58
HOXD12P35452 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD12P35452 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
HOXD12P35452 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXD12P35452 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD12P35452 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
HOXD12P35452 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD12P35452 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HOXD12P35452 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXD12P35452 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXD12P35452 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD12P35452 AC134882.1-201ENST00000603738 1676 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD12P35452 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXD12P35452 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD12P35452 AL031119.1-201ENST00000404707 1879 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.18□□□□□ -1.58
HOXD12P35452 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXD12P35452 RN7SKP95-201ENST00000362860 303 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 OR52E6-202ENST00000379946 954 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 SNORD56.6-201ENST00000384569 71 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HOXD12P35452 SNORD65C-201ENST00000390962 71 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 MIR1271-201ENST00000408537 86 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HOXD12P35452 HMGB3P31-201ENST00000413333 595 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD12P35452 AC246680.2-201ENST00000422106 389 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXD12P35452 AC008072.1-201ENST00000434254 824 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD12P35452 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXD12P35452 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD12P35452 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD12P35452 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXD12P35452 AP000797.2-201ENST00000475768 606 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AC023050.1-201ENST00000498198 304 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AC140172.1-201ENST00000502928 141 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD12P35452 SNORD116-26-201ENST00000516006 96 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD12P35452 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXD12P35452 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD12P35452 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXD12P35452 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD12P35452 AC006518.2-201ENST00000542513 940 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXD12P35452 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXD12P35452 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXD12P35452 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD12P35452 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD12P35452 MIR4691-201ENST00000583764 85 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXD12P35452 AC011477.5-201ENST00000586571 259 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 BNIP3P24-201ENST00000593398 557 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXD12P35452 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXD12P35452 AC025588.2-201ENST00000604851 466 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AL353600.1-201ENST00000608148 251 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AC092954.1-201ENST00000609121 445 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 MIR6780A-201ENST00000615089 68 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AP003485.2-201ENST00000623636 610 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AC022031.1-201ENST00000585985 2593 ntBASIC5.18□□□□□ -1.58
HOXD12P35452 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
HOXD12P35452 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HOXD12P35452 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXD12P35452 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXD12P35452 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXD12P35452 AL592437.2-201ENST00000421655 2434 ntBASIC5.17□□□□□ -1.58
HOXD12P35452 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms