Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL078595.3-201ENST00000623815 1166 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.74□□□□□ -1.65
ABCD3P28288 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.74□□□□□ -1.65
ABCD3P28288 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.74□□□□□ -1.65
ABCD3P28288 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.74□□□□□ -1.65
ABCD3P28288 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
ABCD3P28288 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ABCD3P28288 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
ABCD3P28288 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.74□□□□□ -1.65
ABCD3P28288 SMG1P4-204ENST00000523028 4131 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 SCARNA15-201ENST00000607520 4325 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 AL049555.1-201ENST00000562834 1933 ntBASIC4.74□□□□□ -1.65
ABCD3P28288 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ABCD3P28288 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.73□□□□□ -1.65
ABCD3P28288 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ABCD3P28288 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 ERCC6-202ENST00000374127 1782 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ABCD3P28288 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ABCD3P28288 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ABCD3P28288 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
ABCD3P28288 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ABCD3P28288 SNURFL-201ENST00000309296 343 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 RN7SKP113-201ENST00000363891 295 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 RNU6-707P-201ENST00000364647 95 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ABCD3P28288 AC019155.1-201ENST00000382242 574 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ABCD3P28288 RNU6-444P-201ENST00000383988 108 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 RNU1-106P-201ENST00000384382 164 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 MIR765-201ENST00000390226 114 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ABCD3P28288 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
ABCD3P28288 AL390316.1-201ENST00000406279 553 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.73□□□□□ -1.65
ABCD3P28288 RN7SKP114-201ENST00000410327 279 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 RN7SKP278-201ENST00000410504 342 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 RPL12P9-201ENST00000412942 488 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 OR4K6P-201ENST00000416478 897 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 AC008280.1-201ENST00000418851 412 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 DDX39BP1-205ENST00000422507 192 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 DPRXP1-201ENST00000426312 460 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.73□□□□□ -1.65
ABCD3P28288 AL513175.1-201ENST00000431492 780 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.73□□□□□ -1.65
ABCD3P28288 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.73□□□□□ -1.65
ABCD3P28288 HMGB1P16-201ENST00000447155 540 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 Z99714.1-201ENST00000450463 807 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 PTGES3P5-201ENST00000455109 434 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 AC090114.3-201ENST00000479267 829 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 VPS26AP1-201ENST00000483197 979 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.73□□□□□ -1.65
ABCD3P28288 HMGB1P21-201ENST00000502313 581 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 MTATP6P22-201ENST00000507369 598 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 PGBD4P4-201ENST00000509673 613 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 AC110792.2-201ENST00000510278 224 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
ABCD3P28288 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ABCD3P28288 OR7E128P-201ENST00000532736 1024 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.73□□□□□ -1.65
ABCD3P28288 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.73□□□□□ -1.65
ABCD3P28288 AL390726.5-202ENST00000564800 256 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 AC006116.3-201ENST00000592968 361 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.73□□□□□ -1.65
ABCD3P28288 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 AC010857.1-201ENST00000606398 594 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 AP005432.2-201ENST00000608162 586 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.73□□□□□ -1.65
ABCD3P28288 LINC01739-205ENST00000641890 573 ntBASIC4.73□□□□□ -1.65
ABCD3P28288 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.73□□□□□ -1.65
ABCD3P28288 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ABCD3P28288 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ABCD3P28288 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ABCD3P28288 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
ABCD3P28288 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ABCD3P28288 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.73□□□□□ -1.65
ABCD3P28288 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ABCD3P28288 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ABCD3P28288 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.73□□□□□ -1.65
ABCD3P28288 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
ABCD3P28288 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ABCD3P28288 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ABCD3P28288 ADAM5-202ENST00000399789 1942 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 AP001642.1-201ENST00000624727 2117 ntBASIC4.72□□□□□ -1.65
ABCD3P28288 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCD3P28288 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.72□□□□□ -1.65
ABCD3P28288 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ABCD3P28288 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms