Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.19□□□□□ -1.58
CD40P25942 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.19□□□□□ -1.58
CD40P25942 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 LSM6P2-201ENST00000552208 177 ntBASIC5.19□□□□□ -1.58
CD40P25942 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.19□□□□□ -1.58
CD40P25942 HSPE1P3-201ENST00000559254 309 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.19□□□□□ -1.58
CD40P25942 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 MIR4504-201ENST00000577413 92 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC110743.1-201ENST00000584870 478 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC119403.2-201ENST00000590960 598 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.19□□□□□ -1.58
CD40P25942 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.19□□□□□ -1.58
CD40P25942 AC007684.1-201ENST00000609671 477 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC131902.3-201ENST00000611767 581 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC116447.1-201ENST00000613153 453 ntBASIC5.19□□□□□ -1.58
CD40P25942 AL021918.2-201ENST00000613415 194 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC123768.4-201ENST00000616244 701 ntBASIC5.19□□□□□ -1.58
CD40P25942 AC005618.4-201ENST00000625053 554 ntBASIC5.19□□□□□ -1.58
CD40P25942 AL355480.1-201ENST00000629041 99 ntBASIC5.19□□□□□ -1.58
CD40P25942 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.19□□□□□ -1.58
CD40P25942 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CD40P25942 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.19□□□□□ -1.58
CD40P25942 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.19□□□□□ -1.58
CD40P25942 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 MTND5P26-201ENST00000426018 1752 ntBASIC5.19□□□□□ -1.58
CD40P25942 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD40P25942 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.18□□□□□ -1.58
CD40P25942 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
CD40P25942 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD40P25942 AC079097.1-201ENST00000512187 1399 ntBASIC5.18□□□□□ -1.58
CD40P25942 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.18□□□□□ -1.58
CD40P25942 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD40P25942 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.18□□□□□ -1.58
CD40P25942 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CD40P25942 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CD40P25942 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD40P25942 OR52B3P-201ENST00000314715 928 ntBASIC5.18□□□□□ -1.58
CD40P25942 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.18□□□□□ -1.58
CD40P25942 SELENOWP1-201ENST00000322792 252 ntBASIC5.18□□□□□ -1.58
CD40P25942 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD40P25942 RNY4P24-201ENST00000362735 96 ntBASIC5.18□□□□□ -1.58
CD40P25942 RN7SKP128-201ENST00000364270 303 ntBASIC5.18□□□□□ -1.58
CD40P25942 RN7SKP269-201ENST00000365545 319 ntBASIC5.18□□□□□ -1.58
CD40P25942 AP003170.5-201ENST00000397185 335 ntBASIC5.18□□□□□ -1.58
CD40P25942 RPS3AP23-201ENST00000401762 784 ntBASIC5.18□□□□□ -1.58
CD40P25942 DHFRP6-201ENST00000401776 268 ntBASIC5.18□□□□□ -1.58
CD40P25942 AL096800.1-201ENST00000405326 893 ntBASIC5.18□□□□□ -1.58
CD40P25942 AC016739.1-201ENST00000405359 345 ntBASIC5.18□□□□□ -1.58
CD40P25942 MIR548F1-201ENST00000408667 84 ntBASIC5.18□□□□□ -1.58
CD40P25942 RN7SKP151-201ENST00000410230 316 ntBASIC5.18□□□□□ -1.58
CD40P25942 RNU6-248P-201ENST00000410720 107 ntBASIC5.18□□□□□ -1.58
CD40P25942 AC022028.1-201ENST00000412054 408 ntBASIC5.18□□□□□ -1.58
CD40P25942 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.18□□□□□ -1.58
CD40P25942 EIF1P1-201ENST00000421436 341 ntBASIC5.18□□□□□ -1.58
CD40P25942 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.18□□□□□ -1.58
CD40P25942 AC234779.1-201ENST00000425910 285 ntBASIC5.18□□□□□ -1.58
CD40P25942 AC096632.1-201ENST00000427395 310 ntBASIC5.18□□□□□ -1.58
CD40P25942 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.18□□□□□ -1.58
CD40P25942 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.18□□□□□ -1.58
CD40P25942 MRPS10P2-201ENST00000431226 381 ntBASIC5.18□□□□□ -1.58
CD40P25942 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.18□□□□□ -1.58
CD40P25942 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.18□□□□□ -1.58
CD40P25942 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.18□□□□□ -1.58
CD40P25942 RPS26P56-201ENST00000444468 240 ntBASIC5.18□□□□□ -1.58
CD40P25942 MTND1P1-201ENST00000445453 368 ntBASIC5.18□□□□□ -1.58
CD40P25942 AC093392.2-201ENST00000450682 337 ntBASIC5.18□□□□□ -1.58
CD40P25942 AP006222.1-205ENST00000450734 457 ntBASIC5.18□□□□□ -1.58
CD40P25942 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.18□□□□□ -1.58
CD40P25942 OR6K1P-201ENST00000456766 971 ntBASIC5.18□□□□□ -1.58
CD40P25942 AC104164.1-201ENST00000460282 590 ntBASIC5.18□□□□□ -1.58
CD40P25942 RPS7P7-201ENST00000463499 571 ntBASIC5.18□□□□□ -1.58
CD40P25942 AP000893.1-201ENST00000474462 794 ntBASIC5.18□□□□□ -1.58
CD40P25942 RPL23AP40-201ENST00000487630 390 ntBASIC5.18□□□□□ -1.58
CD40P25942 FTH1P24-201ENST00000503502 462 ntBASIC5.18□□□□□ -1.58
CD40P25942 AC008629.2-201ENST00000503783 483 ntBASIC5.18□□□□□ -1.58
CD40P25942 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.18□□□□□ -1.58
CD40P25942 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.18□□□□□ -1.58
CD40P25942 SNORD46.2-201ENST00000516021 102 ntBASIC5.18□□□□□ -1.58
CD40P25942 MTCYBP41-201ENST00000528913 1123 ntBASIC5.18□□□□□ -1.58
CD40P25942 AP000648.1-201ENST00000529682 397 ntBASIC5.18□□□□□ -1.58
CD40P25942 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.18□□□□□ -1.58
CD40P25942 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.18□□□□□ -1.58
CD40P25942 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.18□□□□□ -1.58
CD40P25942 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.18□□□□□ -1.58
CD40P25942 AL133241.1-201ENST00000556832 487 ntBASIC5.18□□□□□ -1.58
CD40P25942 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.18□□□□□ -1.58
CD40P25942 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.18□□□□□ -1.58
CD40P25942 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.18□□□□□ -1.58
CD40P25942 ZNF322P1-201ENST00000568013 1209 ntBASIC5.18□□□□□ -1.58
CD40P25942 AP001180.3-201ENST00000582221 145 ntBASIC5.18□□□□□ -1.58
CD40P25942 MIR4307-201ENST00000582802 84 ntBASIC5.18□□□□□ -1.58
CD40P25942 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.18□□□□□ -1.58
CD40P25942 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.18□□□□□ -1.58
CD40P25942 COX6CP7-201ENST00000597056 208 ntBASIC5.18□□□□□ -1.58
CD40P25942 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.18□□□□□ -1.58
CD40P25942 AC027243.2-201ENST00000602530 724 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms