Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.81□□□□□ -1.8
USF1P22415 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.81□□□□□ -1.8
USF1P22415 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.81□□□□□ -1.8
USF1P22415 AC010476.1-201ENST00000519111 851 ntBASIC3.81□□□□□ -1.8
USF1P22415 AC090819.1-201ENST00000523800 1111 ntBASIC3.81□□□□□ -1.8
USF1P22415 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.81□□□□□ -1.8
USF1P22415 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.81□□□□□ -1.8
USF1P22415 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.81□□□□□ -1.8
USF1P22415 FKBP1BP1-201ENST00000553366 325 ntBASIC3.81□□□□□ -1.8
USF1P22415 AC092868.3-201ENST00000560515 784 ntBASIC3.81□□□□□ -1.8
USF1P22415 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.81□□□□□ -1.8
USF1P22415 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.81□□□□□ -1.8
USF1P22415 MIR3138-201ENST00000585238 82 ntBASIC3.81□□□□□ -1.8
USF1P22415 HMGB2P1-201ENST00000591146 634 ntBASIC3.81□□□□□ -1.8
USF1P22415 AC010857.1-201ENST00000606398 594 ntBASIC3.81□□□□□ -1.8
USF1P22415 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.81□□□□□ -1.8
USF1P22415 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USF1P22415 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.81□□□□□ -1.8
USF1P22415 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
USF1P22415 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
USF1P22415 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
USF1P22415 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
USF1P22415 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
USF1P22415 AL672167.1-203ENST00000641299 2975 ntBASIC3.8□□□□□ -1.8
USF1P22415 OR56B2P-201ENST00000317102 954 ntBASIC3.8□□□□□ -1.8
USF1P22415 SNORD96B-201ENST00000386148 79 ntBASIC3.8□□□□□ -1.8
USF1P22415 OR51B3P-201ENST00000412287 913 ntBASIC3.8□□□□□ -1.8
USF1P22415 CEACAMP8-201ENST00000413902 580 ntBASIC3.8□□□□□ -1.8
USF1P22415 AC048351.1-201ENST00000420064 602 ntBASIC3.8□□□□□ -1.8
USF1P22415 RPL7P57-201ENST00000423238 740 ntBASIC3.8□□□□□ -1.8
USF1P22415 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.8□□□□□ -1.8
USF1P22415 TDGF1P1-201ENST00000445734 527 ntBASIC3.8□□□□□ -1.8
USF1P22415 PHBP16-201ENST00000446318 950 ntBASIC3.8□□□□□ -1.8
USF1P22415 RAD1P2-201ENST00000446414 663 ntBASIC3.8□□□□□ -1.8
USF1P22415 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.8□□□□□ -1.8
USF1P22415 DEFB109F-201ENST00000491870 277 ntBASIC3.8□□□□□ -1.8
USF1P22415 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.8□□□□□ -1.8
USF1P22415 AC010627.1-201ENST00000503819 1294 ntBASIC3.8□□□□□ -1.8
USF1P22415 STMN1P2-201ENST00000508435 439 ntBASIC3.8□□□□□ -1.8
USF1P22415 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.8□□□□□ -1.8
USF1P22415 SNORA70.17-201ENST00000516449 133 ntBASIC3.8□□□□□ -1.8
USF1P22415 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.8□□□□□ -1.8
USF1P22415 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.8□□□□□ -1.8
USF1P22415 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.8□□□□□ -1.8
USF1P22415 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.8□□□□□ -1.8
USF1P22415 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.8□□□□□ -1.8
USF1P22415 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.8□□□□□ -1.8
USF1P22415 PSMB7P1-201ENST00000556349 514 ntBASIC3.8□□□□□ -1.8
USF1P22415 RPL21P7-201ENST00000557463 483 ntBASIC3.8□□□□□ -1.8
USF1P22415 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.8□□□□□ -1.8
USF1P22415 MIR1254-2-201ENST00000579553 63 ntBASIC3.8□□□□□ -1.8
USF1P22415 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.8□□□□□ -1.8
USF1P22415 AC005520.3-201ENST00000602874 370 ntBASIC3.8□□□□□ -1.8
USF1P22415 AC026979.4-201ENST00000606555 645 ntBASIC3.8□□□□□ -1.8
USF1P22415 SNX18P1Y-201ENST00000616231 511 ntBASIC3.8□□□□□ -1.8
USF1P22415 AP000843.1-201ENST00000624880 701 ntBASIC3.8□□□□□ -1.8
USF1P22415 AC119674.1-212ENST00000641155 993 ntBASIC3.8□□□□□ -1.8
USF1P22415 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.8□□□□□ -1.8
USF1P22415 AL356489.2-201ENST00000566968 3528 ntBASIC3.8□□□□□ -1.8
USF1P22415 MAPK10-304ENST00000641341 3984 ntBASIC3.8□□□□□ -1.8
USF1P22415 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USF1P22415 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
USF1P22415 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
USF1P22415 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USF1P22415 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.79□□□□□ -1.8
USF1P22415 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
USF1P22415 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
USF1P22415 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
USF1P22415 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USF1P22415 RNU6-532P-201ENST00000384318 107 ntBASIC3.79□□□□□ -1.8
USF1P22415 MIR320B1-201ENST00000390209 79 ntBASIC3.79□□□□□ -1.8
USF1P22415 GSTA12P-201ENST00000402398 508 ntBASIC3.79□□□□□ -1.8
USF1P22415 TMSB10P2-201ENST00000416049 131 ntBASIC3.79□□□□□ -1.8
USF1P22415 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.79□□□□□ -1.8
USF1P22415 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USF1P22415 AC007563.3-201ENST00000433233 371 ntBASIC3.79□□□□□ -1.8
USF1P22415 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.79□□□□□ -1.8
USF1P22415 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.79□□□□□ -1.8
USF1P22415 PPIAP13-201ENST00000434706 478 ntBASIC3.79□□□□□ -1.8
USF1P22415 MAPRE1P3-201ENST00000435438 796 ntBASIC3.79□□□□□ -1.8
USF1P22415 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.79□□□□□ -1.8
USF1P22415 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USF1P22415 AC239367.2-201ENST00000447309 705 ntBASIC3.79□□□□□ -1.8
USF1P22415 AC114755.5-201ENST00000447760 831 ntBASIC3.79□□□□□ -1.8
USF1P22415 RN7SL98P-201ENST00000462271 300 ntBASIC3.79□□□□□ -1.8
USF1P22415 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.79□□□□□ -1.8
USF1P22415 AC108022.1-201ENST00000493466 478 ntBASIC3.79□□□□□ -1.8
USF1P22415 AC021146.7-201ENST00000509604 775 ntBASIC3.79□□□□□ -1.8
USF1P22415 PARP4P3-201ENST00000510265 317 ntBASIC3.79□□□□□ -1.8
USF1P22415 AC026402.1-201ENST00000513642 170 ntBASIC3.79□□□□□ -1.8
USF1P22415 RNU6-347P-201ENST00000516658 105 ntBASIC3.79□□□□□ -1.8
USF1P22415 MRPL49P2-201ENST00000521066 465 ntBASIC3.79□□□□□ -1.8
USF1P22415 OR4V1P-201ENST00000525394 1140 ntBASIC3.79□□□□□ -1.8
USF1P22415 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.79□□□□□ -1.8
USF1P22415 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
USF1P22415 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.79□□□□□ -1.8
USF1P22415 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.79□□□□□ -1.8
USF1P22415 AC009268.1-201ENST00000561352 1203 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms