Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RPS4XP9-201ENST00000405151 780 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PDGFRAP16234 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFRAP16234 AL807761.1-201ENST00000417622 171 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFRAP16234 EIF2S2P3-201ENST00000428356 999 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 PPIAP13-201ENST00000434706 478 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 CBX1P4-201ENST00000439415 457 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 AL353093.1-201ENST00000441292 436 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 RNFT1P2-201ENST00000443064 757 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.78□□□□□ -1.64
PDGFRAP16234 AC097499.1-201ENST00000444277 208 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 ARL2BPP10-201ENST00000446487 531 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.78□□□□□ -1.64
PDGFRAP16234 NDUFB4P12-201ENST00000513465 390 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 RNA5SP446-201ENST00000515955 82 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 SNORA26.10-201ENST00000516427 141 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.78□□□□□ -1.64
PDGFRAP16234 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFRAP16234 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFRAP16234 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.78□□□□□ -1.64
PDGFRAP16234 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.78□□□□□ -1.64
PDGFRAP16234 AC243654.2-201ENST00000612843 443 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 AC005086.4-201ENST00000623065 213 ntBASIC4.78□□□□□ -1.64
PDGFRAP16234 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.78□□□□□ -1.64
PDGFRAP16234 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFRAP16234 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFRAP16234 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFRAP16234 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.78□□□□□ -1.64
PDGFRAP16234 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PDGFRAP16234 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PDGFRAP16234 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFRAP16234 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFRAP16234 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.77□□□□□ -1.65
PDGFRAP16234 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.77□□□□□ -1.65
PDGFRAP16234 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.77□□□□□ -1.65
PDGFRAP16234 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFRAP16234 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFRAP16234 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PDGFRAP16234 OR4K15-201ENST00000305051 1216 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFRAP16234 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PDGFRAP16234 RNA5SP443-201ENST00000363083 132 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 SNORD113.2-201ENST00000364166 89 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFRAP16234 TCEA1P4-201ENST00000415066 844 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 LINC01881-201ENST00000416103 412 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 MTND4P11-201ENST00000417020 1058 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.77□□□□□ -1.65
PDGFRAP16234 RPL21P91-201ENST00000429231 479 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFRAP16234 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFRAP16234 AC092685.1-201ENST00000447960 1243 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.77□□□□□ -1.65
PDGFRAP16234 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.77□□□□□ -1.65
PDGFRAP16234 MTND6P6-201ENST00000478031 263 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.77□□□□□ -1.65
PDGFRAP16234 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFRAP16234 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.77□□□□□ -1.65
PDGFRAP16234 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.77□□□□□ -1.65
PDGFRAP16234 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PDGFRAP16234 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.77□□□□□ -1.65
PDGFRAP16234 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFRAP16234 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFRAP16234 AC068790.4-201ENST00000602474 263 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 AC023762.1-201ENST00000603280 584 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 SNORD91B-202ENST00000608459 222 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
PDGFRAP16234 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.77□□□□□ -1.65
PDGFRAP16234 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
PDGFRAP16234 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.77□□□□□ -1.65
PDGFRAP16234 DHX40P1-201ENST00000588725 1412 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
PDGFRAP16234 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
PDGFRAP16234 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
PDGFRAP16234 AL132640.2-201ENST00000559968 1698 ntBASIC4.77□□□□□ -1.65
PDGFRAP16234 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFRAP16234 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.76□□□□□ -1.65
PDGFRAP16234 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFRAP16234 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PDGFRAP16234 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PDGFRAP16234 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFRAP16234 RNU6-609P-201ENST00000365459 107 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.76□□□□□ -1.65
PDGFRAP16234 RNA5SP397-201ENST00000391323 118 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 SDHCP2-201ENST00000398565 501 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 RPS3AP23-201ENST00000401762 784 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 FCF1P5-201ENST00000406490 482 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.76□□□□□ -1.65
PDGFRAP16234 RPL23AP93-201ENST00000440847 484 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 H2AFZP6-201ENST00000444403 394 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 TPT1P13-201ENST00000449760 499 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFRAP16234 CYCSP53-201ENST00000455540 265 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 AC078857.1-201ENST00000469870 667 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 OR52A4P-201ENST00000472867 958 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFRAP16234 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFRAP16234 RN7SKP92-201ENST00000517266 244 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms