Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.51□□□□□ -1.69
COL11A1P12107 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.51□□□□□ -1.69
COL11A1P12107 PSMC1P13-201ENST00000458195 985 ntBASIC4.51□□□□□ -1.69
COL11A1P12107 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.51□□□□□ -1.69
COL11A1P12107 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.51□□□□□ -1.69
COL11A1P12107 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.51□□□□□ -1.69
COL11A1P12107 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL11A1P12107 AC079171.1-201ENST00000568788 914 ntBASIC4.51□□□□□ -1.69
COL11A1P12107 SNORA51-201ENST00000606420 132 ntBASIC4.51□□□□□ -1.69
COL11A1P12107 RNU1-30P-201ENST00000606575 163 ntBASIC4.51□□□□□ -1.69
COL11A1P12107 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.51□□□□□ -1.69
COL11A1P12107 MIR7154-201ENST00000620673 73 ntBASIC4.51□□□□□ -1.69
COL11A1P12107 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL11A1P12107 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.51□□□□□ -1.69
COL11A1P12107 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.51□□□□□ -1.69
COL11A1P12107 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.51□□□□□ -1.69
COL11A1P12107 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
COL11A1P12107 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.51□□□□□ -1.69
COL11A1P12107 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.51□□□□□ -1.69
COL11A1P12107 AC117434.1-201ENST00000419971 836 ntBASIC4.51□□□□□ -1.69
COL11A1P12107 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.51□□□□□ -1.69
COL11A1P12107 ACTR3P3-201ENST00000480448 893 ntBASIC4.51□□□□□ -1.69
COL11A1P12107 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.51□□□□□ -1.69
COL11A1P12107 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.51□□□□□ -1.69
COL11A1P12107 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.51□□□□□ -1.69
COL11A1P12107 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.51□□□□□ -1.69
COL11A1P12107 AL354760.1-201ENST00000608357 643 ntBASIC4.51□□□□□ -1.69
COL11A1P12107 AL121890.2-201ENST00000617644 465 ntBASIC4.51□□□□□ -1.69
COL11A1P12107 AC124312.6-202ENST00000623624 418 ntBASIC4.51□□□□□ -1.69
COL11A1P12107 AC020978.9-201ENST00000624380 1141 ntBASIC4.51□□□□□ -1.69
COL11A1P12107 AC009093.8-201ENST00000641769 292 ntBASIC4.51□□□□□ -1.69
COL11A1P12107 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
COL11A1P12107 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
COL11A1P12107 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
COL11A1P12107 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.5□□□□□ -1.69
COL11A1P12107 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
COL11A1P12107 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
COL11A1P12107 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A1P12107 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.5□□□□□ -1.69
COL11A1P12107 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
COL11A1P12107 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.5□□□□□ -1.69
COL11A1P12107 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A1P12107 SOD2P1-201ENST00000396543 562 ntBASIC4.5□□□□□ -1.69
COL11A1P12107 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
COL11A1P12107 Z97055.1-201ENST00000419730 712 ntBASIC4.5□□□□□ -1.69
COL11A1P12107 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.5□□□□□ -1.69
COL11A1P12107 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.5□□□□□ -1.69
COL11A1P12107 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.5□□□□□ -1.69
COL11A1P12107 PAICSP4-201ENST00000517543 1253 ntBASIC4.5□□□□□ -1.69
COL11A1P12107 AC008694.2-201ENST00000517591 306 ntBASIC4.5□□□□□ -1.69
COL11A1P12107 AC022695.1-201ENST00000522089 237 ntBASIC4.5□□□□□ -1.69
COL11A1P12107 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.5□□□□□ -1.69
COL11A1P12107 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.5□□□□□ -1.69
COL11A1P12107 AC093591.2-201ENST00000565254 3843 ntBASIC4.5□□□□□ -1.69
COL11A1P12107 AC079684.1-201ENST00000621405 437 ntBASIC4.5□□□□□ -1.69
COL11A1P12107 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.5□□□□□ -1.69
COL11A1P12107 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A1P12107 AP002001.2-201ENST00000529025 1469 ntBASIC4.5□□□□□ -1.69
COL11A1P12107 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A1P12107 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.5□□□□□ -1.69
COL11A1P12107 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A1P12107 AC023632.6-201ENST00000624338 2177 ntBASIC4.5□□□□□ -1.69
COL11A1P12107 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A1P12107 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
COL11A1P12107 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL11A1P12107 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A1P12107 SNORA11.2-201ENST00000408318 127 ntBASIC4.49□□□□□ -1.69
COL11A1P12107 RPS3AP46-201ENST00000448352 682 ntBASIC4.49□□□□□ -1.69
COL11A1P12107 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A1P12107 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.49□□□□□ -1.69
COL11A1P12107 RPL31P61-201ENST00000496160 376 ntBASIC4.49□□□□□ -1.69
COL11A1P12107 AC110768.1-201ENST00000509222 400 ntBASIC4.49□□□□□ -1.69
COL11A1P12107 OR4A2P-201ENST00000527276 913 ntBASIC4.49□□□□□ -1.69
COL11A1P12107 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.49□□□□□ -1.69
COL11A1P12107 AC025627.2-201ENST00000576220 160 ntBASIC4.49□□□□□ -1.69
COL11A1P12107 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.49□□□□□ -1.69
COL11A1P12107 AL391497.1-201ENST00000608671 547 ntBASIC4.49□□□□□ -1.69
COL11A1P12107 AL645927.2-201ENST00000618350 349 ntBASIC4.49□□□□□ -1.69
COL11A1P12107 YES1-203ENST00000577961 4554 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A1P12107 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A1P12107 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A1P12107 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A1P12107 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A1P12107 A2MP1-204ENST00000566278 4130 ntBASIC4.49□□□□□ -1.69
COL11A1P12107 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A1P12107 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A1P12107 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COL11A1P12107 TRIM60P17-201ENST00000415181 719 ntBASIC4.49□□□□□ -1.69
COL11A1P12107 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A1P12107 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A1P12107 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.49□□□□□ -1.69
COL11A1P12107 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL11A1P12107 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A1P12107 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.49□□□□□ -1.69
COL11A1P12107 AC007179.3-201ENST00000604976 235 ntBASIC4.49□□□□□ -1.69
COL11A1P12107 AL591424.2-201ENST00000617023 128 ntBASIC4.49□□□□□ -1.69
COL11A1P12107 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A1P12107 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.49□□□□□ -1.69
COL11A1P12107 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
COL11A1P12107 CASC19-284ENST00000642142 1868 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms