Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AL121834.1-202ENST00000404494 277 ntBASIC5□□□□□ -1.61
TOP1P11387 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5□□□□□ -1.61
TOP1P11387 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5□□□□□ -1.61
TOP1P11387 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5□□□□□ -1.61
TOP1P11387 RCC2P2-201ENST00000422174 918 ntBASIC5□□□□□ -1.61
TOP1P11387 RPL23AP38-201ENST00000423801 469 ntBASIC5□□□□□ -1.61
TOP1P11387 BTF3P10-201ENST00000433415 495 ntBASIC5□□□□□ -1.61
TOP1P11387 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5□□□□□ -1.61
TOP1P11387 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5□□□□□ -1.61
TOP1P11387 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5□□□□□ -1.61
TOP1P11387 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5□□□□□ -1.61
TOP1P11387 CALM1P2-201ENST00000452941 448 ntBASIC5□□□□□ -1.61
TOP1P11387 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5□□□□□ -1.61
TOP1P11387 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5□□□□□ -1.61
TOP1P11387 KCTD9P2-201ENST00000512203 1013 ntBASIC5□□□□□ -1.61
TOP1P11387 SNORA31.9-201ENST00000516429 84 ntBASIC5□□□□□ -1.61
TOP1P11387 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5□□□□□ -1.61
TOP1P11387 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5□□□□□ -1.61
TOP1P11387 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5□□□□□ -1.61
TOP1P11387 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
TOP1P11387 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5□□□□□ -1.61
TOP1P11387 AC006064.5-201ENST00000541782 248 ntBASIC5□□□□□ -1.61
TOP1P11387 AC087888.1-201ENST00000550884 1254 ntBASIC5□□□□□ -1.61
TOP1P11387 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5□□□□□ -1.61
TOP1P11387 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5□□□□□ -1.61
TOP1P11387 MIR8059-201ENST00000620427 81 ntBASIC5□□□□□ -1.61
TOP1P11387 BMS1P21-201ENST00000634565 365 ntBASIC5□□□□□ -1.61
TOP1P11387 AC008013.2-202ENST00000637965 364 ntBASIC5□□□□□ -1.61
TOP1P11387 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5□□□□□ -1.61
TOP1P11387 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
TOP1P11387 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5□□□□□ -1.61
TOP1P11387 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5□□□□□ -1.61
TOP1P11387 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5□□□□□ -1.61
TOP1P11387 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5□□□□□ -1.61
TOP1P11387 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
TOP1P11387 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5□□□□□ -1.61
TOP1P11387 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5□□□□□ -1.61
TOP1P11387 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
TOP1P11387 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TOP1P11387 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TOP1P11387 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TOP1P11387 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TOP1P11387 MT-TP-201ENST00000387461 68 ntBASIC4.99□□□□□ -1.61
TOP1P11387 FABP12P1-201ENST00000401911 322 ntBASIC4.99□□□□□ -1.61
TOP1P11387 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.99□□□□□ -1.61
TOP1P11387 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TOP1P11387 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.99□□□□□ -1.61
TOP1P11387 AC073335.1-201ENST00000427776 363 ntBASIC4.99□□□□□ -1.61
TOP1P11387 AL357520.1-201ENST00000441557 453 ntBASIC4.99□□□□□ -1.61
TOP1P11387 EEF1A1P1-201ENST00000447052 739 ntBASIC4.99□□□□□ -1.61
TOP1P11387 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.99□□□□□ -1.61
TOP1P11387 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.99□□□□□ -1.61
TOP1P11387 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.99□□□□□ -1.61
TOP1P11387 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.99□□□□□ -1.61
TOP1P11387 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.99□□□□□ -1.61
TOP1P11387 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.99□□□□□ -1.61
TOP1P11387 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.99□□□□□ -1.61
TOP1P11387 AC009237.17-201ENST00000618111 748 ntBASIC4.99□□□□□ -1.61
TOP1P11387 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.99□□□□□ -1.61
TOP1P11387 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.99□□□□□ -1.61
TOP1P11387 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
TOP1P11387 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
TOP1P11387 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.99□□□□□ -1.61
TOP1P11387 AL133243.3-201ENST00000617415 3004 ntBASIC4.99□□□□□ -1.61
TOP1P11387 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
TOP1P11387 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TOP1P11387 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
TOP1P11387 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TOP1P11387 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TOP1P11387 RNA5SP52-201ENST00000362448 134 ntBASIC4.98□□□□□ -1.61
TOP1P11387 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.98□□□□□ -1.61
TOP1P11387 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TOP1P11387 RNU6-225P-201ENST00000384613 103 ntBASIC4.98□□□□□ -1.61
TOP1P11387 AC004975.1-201ENST00000428733 208 ntBASIC4.98□□□□□ -1.61
TOP1P11387 GEMIN8P3-201ENST00000445417 720 ntBASIC4.98□□□□□ -1.61
TOP1P11387 RPL7P19-201ENST00000469948 618 ntBASIC4.98□□□□□ -1.61
TOP1P11387 AC104164.2-201ENST00000496953 495 ntBASIC4.98□□□□□ -1.61
TOP1P11387 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.98□□□□□ -1.61
TOP1P11387 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.98□□□□□ -1.61
TOP1P11387 AC099522.1-202ENST00000514718 367 ntBASIC4.98□□□□□ -1.61
TOP1P11387 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TOP1P11387 AC068446.3-201ENST00000555285 382 ntBASIC4.98□□□□□ -1.61
TOP1P11387 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.98□□□□□ -1.61
TOP1P11387 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.98□□□□□ -1.61
TOP1P11387 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.98□□□□□ -1.61
TOP1P11387 AC020910.2-201ENST00000603635 610 ntBASIC4.98□□□□□ -1.61
TOP1P11387 AC012213.4-201ENST00000606457 354 ntBASIC4.98□□□□□ -1.61
TOP1P11387 AC023043.4-201ENST00000612081 449 ntBASIC4.98□□□□□ -1.61
TOP1P11387 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TOP1P11387 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.98□□□□□ -1.61
TOP1P11387 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TOP1P11387 AC019278.1-201ENST00000623516 479 ntBASIC4.98□□□□□ -1.61
TOP1P11387 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TOP1P11387 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TOP1P11387 NOL8P1-201ENST00000508336 3529 ntBASIC4.98□□□□□ -1.61
TOP1P11387 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TOP1P11387 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
TOP1P11387 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TOP1P11387 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
TOP1P11387 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms