Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD28P10747 AL583835.1-201ENST00000399570 407 ntBASIC3.4□□□□□ -1.87
CD28P10747 AC025750.1-201ENST00000399891 379 ntBASIC3.4□□□□□ -1.87
CD28P10747 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.4□□□□□ -1.87
CD28P10747 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CD28P10747 MFSD13B-201ENST00000420133 1290 ntBASIC3.4□□□□□ -1.87
CD28P10747 UBE2V2P3-201ENST00000433562 437 ntBASIC3.4□□□□□ -1.87
CD28P10747 MTND2P2-201ENST00000434633 945 ntBASIC3.4□□□□□ -1.87
CD28P10747 PPIAP13-201ENST00000434706 478 ntBASIC3.4□□□□□ -1.87
CD28P10747 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.4□□□□□ -1.87
CD28P10747 MTCYBP29-201ENST00000436327 1006 ntBASIC3.4□□□□□ -1.87
CD28P10747 ARL5AP3-201ENST00000439327 386 ntBASIC3.4□□□□□ -1.87
CD28P10747 Z99127.2-201ENST00000441426 334 ntBASIC3.4□□□□□ -1.87
CD28P10747 HMGB3P9-201ENST00000441799 583 ntBASIC3.4□□□□□ -1.87
CD28P10747 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.4□□□□□ -1.87
CD28P10747 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.4□□□□□ -1.87
CD28P10747 CDC27P1-201ENST00000445384 715 ntBASIC3.4□□□□□ -1.87
CD28P10747 RAD1P2-201ENST00000446414 663 ntBASIC3.4□□□□□ -1.87
CD28P10747 AC239367.2-201ENST00000447309 705 ntBASIC3.4□□□□□ -1.87
CD28P10747 VN1R48P-201ENST00000448149 1036 ntBASIC3.4□□□□□ -1.87
CD28P10747 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.4□□□□□ -1.87
CD28P10747 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CD28P10747 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.4□□□□□ -1.87
CD28P10747 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CD28P10747 AC008958.1-201ENST00000511047 682 ntBASIC3.4□□□□□ -1.87
CD28P10747 AC021146.3-201ENST00000511911 260 ntBASIC3.4□□□□□ -1.87
CD28P10747 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.4□□□□□ -1.87
CD28P10747 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.4□□□□□ -1.87
CD28P10747 RNA5SP360-201ENST00000516555 118 ntBASIC3.4□□□□□ -1.87
CD28P10747 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.4□□□□□ -1.87
CD28P10747 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CD28P10747 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.4□□□□□ -1.87
CD28P10747 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CD28P10747 OR5BC1P-201ENST00000529327 739 ntBASIC3.4□□□□□ -1.87
CD28P10747 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.4□□□□□ -1.87
CD28P10747 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.4□□□□□ -1.87
CD28P10747 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.4□□□□□ -1.87
CD28P10747 RPL21P7-201ENST00000557463 483 ntBASIC3.4□□□□□ -1.87
CD28P10747 AC106785.1-201ENST00000565935 262 ntBASIC3.4□□□□□ -1.87
CD28P10747 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.4□□□□□ -1.87
CD28P10747 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.4□□□□□ -1.87
CD28P10747 AC008966.2-201ENST00000606157 453 ntBASIC3.4□□□□□ -1.87
CD28P10747 AC025175.1-201ENST00000606482 759 ntBASIC3.4□□□□□ -1.87
CD28P10747 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD28P10747 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD28P10747 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD28P10747 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.4□□□□□ -1.87
CD28P10747 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CD28P10747 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CD28P10747 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD28P10747 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CD28P10747 AP001273.1-201ENST00000624493 3152 ntBASIC3.39□□□□□ -1.87
CD28P10747 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CD28P10747 OR51H2P-202ENST00000641424 3046 ntBASIC3.39□□□□□ -1.87
CD28P10747 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD28P10747 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CD28P10747 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CD28P10747 SPRR2C-201ENST00000290702 219 ntBASIC3.39□□□□□ -1.87
CD28P10747 RNU6-819P-201ENST00000364116 107 ntBASIC3.39□□□□□ -1.87
CD28P10747 RNU1-64P-201ENST00000365443 163 ntBASIC3.39□□□□□ -1.87
CD28P10747 AL161909.1-201ENST00000397390 712 ntBASIC3.39□□□□□ -1.87
CD28P10747 ATP5F1P2-201ENST00000398143 760 ntBASIC3.39□□□□□ -1.87
CD28P10747 HDGFP1-201ENST00000405943 252 ntBASIC3.39□□□□□ -1.87
CD28P10747 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.39□□□□□ -1.87
CD28P10747 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CD28P10747 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.39□□□□□ -1.87
CD28P10747 RNU6-628P-201ENST00000410675 107 ntBASIC3.39□□□□□ -1.87
CD28P10747 RPL6P29-201ENST00000414863 865 ntBASIC3.39□□□□□ -1.87
CD28P10747 AC073136.2-201ENST00000417282 849 ntBASIC3.39□□□□□ -1.87
CD28P10747 AC244453.4-201ENST00000419150 388 ntBASIC3.39□□□□□ -1.87
CD28P10747 AL590609.2-201ENST00000421430 368 ntBASIC3.39□□□□□ -1.87
CD28P10747 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.39□□□□□ -1.87
CD28P10747 YY1P1-201ENST00000427625 668 ntBASIC3.39□□□□□ -1.87
CD28P10747 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.39□□□□□ -1.87
CD28P10747 RPL23AP25-201ENST00000430973 463 ntBASIC3.39□□□□□ -1.87
CD28P10747 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.39□□□□□ -1.87
CD28P10747 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.39□□□□□ -1.87
CD28P10747 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.39□□□□□ -1.87
CD28P10747 RPL35AP15-201ENST00000468042 339 ntBASIC3.39□□□□□ -1.87
CD28P10747 RN7SL809P-201ENST00000482040 297 ntBASIC3.39□□□□□ -1.87
CD28P10747 RPL35P6-201ENST00000490024 372 ntBASIC3.39□□□□□ -1.87
CD28P10747 RN7SL812P-201ENST00000493791 279 ntBASIC3.39□□□□□ -1.87
CD28P10747 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.39□□□□□ -1.87
CD28P10747 RNA5SP49-201ENST00000516450 115 ntBASIC3.39□□□□□ -1.87
CD28P10747 AF186190.1-201ENST00000517470 480 ntBASIC3.39□□□□□ -1.87
CD28P10747 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.39□□□□□ -1.87
CD28P10747 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.39□□□□□ -1.87
CD28P10747 NPM1P35-201ENST00000533043 868 ntBASIC3.39□□□□□ -1.87
CD28P10747 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.39□□□□□ -1.87
CD28P10747 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.39□□□□□ -1.87
CD28P10747 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.39□□□□□ -1.87
CD28P10747 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CD28P10747 AGGF1P6-201ENST00000569213 976 ntBASIC3.39□□□□□ -1.87
CD28P10747 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.39□□□□□ -1.87
CD28P10747 BMS1P7-201ENST00000602440 1052 ntBASIC3.39□□□□□ -1.87
CD28P10747 AC090181.2-201ENST00000602975 672 ntBASIC3.39□□□□□ -1.87
CD28P10747 MTCO2P22-201ENST00000603246 681 ntBASIC3.39□□□□□ -1.87
CD28P10747 AC026979.4-201ENST00000606555 645 ntBASIC3.39□□□□□ -1.87
CD28P10747 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.39□□□□□ -1.87
CD28P10747 SNX18P1Y-201ENST00000616231 511 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms