Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RNU5A-7P-201ENST00000515979 116 ntBASIC5.02□□□□□ -1.61
RB1P06400 AP003355.1-201ENST00000518956 587 ntBASIC5.02□□□□□ -1.61
RB1P06400 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.02□□□□□ -1.61
RB1P06400 AC025260.1-201ENST00000548858 430 ntBASIC5.02□□□□□ -1.61
RB1P06400 LSM3P2-201ENST00000551246 273 ntBASIC5.02□□□□□ -1.61
RB1P06400 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.02□□□□□ -1.61
RB1P06400 AC006349.1-201ENST00000555526 235 ntBASIC5.02□□□□□ -1.61
RB1P06400 AC105129.1-201ENST00000560250 297 ntBASIC5.02□□□□□ -1.61
RB1P06400 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.02□□□□□ -1.61
RB1P06400 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.02□□□□□ -1.61
RB1P06400 AC006116.7-201ENST00000590141 756 ntBASIC5.02□□□□□ -1.61
RB1P06400 AC067959.1-201ENST00000604334 379 ntBASIC5.02□□□□□ -1.61
RB1P06400 OR7A19P-201ENST00000608051 733 ntBASIC5.02□□□□□ -1.61
RB1P06400 AC055764.2-201ENST00000610089 670 ntBASIC5.02□□□□□ -1.61
RB1P06400 VN1R9P-201ENST00000614184 867 ntBASIC5.02□□□□□ -1.61
RB1P06400 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.02□□□□□ -1.61
RB1P06400 AL138955.1-201ENST00000622881 1040 ntBASIC5.02□□□□□ -1.61
RB1P06400 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 VN2R3P-201ENST00000422626 1412 ntBASIC5.02□□□□□ -1.61
RB1P06400 MTCO1P18-201ENST00000455518 1419 ntBASIC5.02□□□□□ -1.61
RB1P06400 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 AC005332.5-201ENST00000591222 2919 ntBASIC5.02□□□□□ -1.61
RB1P06400 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RB1P06400 BX005019.1-201ENST00000561881 1810 ntBASIC5.02□□□□□ -1.61
RB1P06400 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.01□□□□□ -1.61
RB1P06400 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RB1P06400 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.01□□□□□ -1.61
RB1P06400 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.01□□□□□ -1.61
RB1P06400 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RB1P06400 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.01□□□□□ -1.61
RB1P06400 AC104623.2-202ENST00000623477 4002 ntBASIC5.01□□□□□ -1.61
RB1P06400 AC104118.1-201ENST00000607625 1589 ntBASIC5.01□□□□□ -1.61
RB1P06400 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RB1P06400 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RB1P06400 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.01□□□□□ -1.61
RB1P06400 RNU6-354P-201ENST00000383862 107 ntBASIC5.01□□□□□ -1.61
RB1P06400 RNU6-610P-201ENST00000384264 107 ntBASIC5.01□□□□□ -1.61
RB1P06400 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RB1P06400 RPL23AP59-201ENST00000399415 461 ntBASIC5.01□□□□□ -1.61
RB1P06400 RPL21P67-201ENST00000402896 478 ntBASIC5.01□□□□□ -1.61
RB1P06400 RPL12P9-201ENST00000412942 488 ntBASIC5.01□□□□□ -1.61
RB1P06400 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.01□□□□□ -1.61
RB1P06400 AC007738.1-201ENST00000413892 348 ntBASIC5.01□□□□□ -1.61
RB1P06400 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.01□□□□□ -1.61
RB1P06400 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.01□□□□□ -1.61
RB1P06400 RPS29P17-201ENST00000430795 166 ntBASIC5.01□□□□□ -1.61
RB1P06400 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.01□□□□□ -1.61
RB1P06400 RPL7AP61-201ENST00000443410 636 ntBASIC5.01□□□□□ -1.61
RB1P06400 CYCSP24-201ENST00000445119 316 ntBASIC5.01□□□□□ -1.61
RB1P06400 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.01□□□□□ -1.61
RB1P06400 AC079168.2-201ENST00000453977 416 ntBASIC5.01□□□□□ -1.61
RB1P06400 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.01□□□□□ -1.61
RB1P06400 RPL23AP12-201ENST00000467573 473 ntBASIC5.01□□□□□ -1.61
RB1P06400 AC104687.1-201ENST00000485829 412 ntBASIC5.01□□□□□ -1.61
RB1P06400 RN7SL810P-201ENST00000493031 276 ntBASIC5.01□□□□□ -1.61
RB1P06400 RPL36AP41-201ENST00000493820 306 ntBASIC5.01□□□□□ -1.61
RB1P06400 AC005912.1-201ENST00000495392 255 ntBASIC5.01□□□□□ -1.61
RB1P06400 AC111193.1-201ENST00000504097 155 ntBASIC5.01□□□□□ -1.61
RB1P06400 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.01□□□□□ -1.61
RB1P06400 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.01□□□□□ -1.61
RB1P06400 OR5AK3P-201ENST00000527486 1297 ntBASIC5.01□□□□□ -1.61
RB1P06400 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.01□□□□□ -1.61
RB1P06400 MTND5P21-201ENST00000531961 522 ntBASIC5.01□□□□□ -1.61
RB1P06400 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.01□□□□□ -1.61
RB1P06400 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.01□□□□□ -1.61
RB1P06400 AC127024.5-201ENST00000580085 462 ntBASIC5.01□□□□□ -1.61
RB1P06400 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.01□□□□□ -1.61
RB1P06400 ZNF92P3-201ENST00000596594 954 ntBASIC5.01□□□□□ -1.61
RB1P06400 AC008759.3-201ENST00000613300 508 ntBASIC5.01□□□□□ -1.61
RB1P06400 AC114781.5-201ENST00000615297 108 ntBASIC5.01□□□□□ -1.61
RB1P06400 AC016957.2-201ENST00000616998 848 ntBASIC5.01□□□□□ -1.61
RB1P06400 AC093875.1-201ENST00000623688 504 ntBASIC5.01□□□□□ -1.61
RB1P06400 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.01□□□□□ -1.61
RB1P06400 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RB1P06400 AC108467.2-201ENST00000617640 1597 ntBASIC5□□□□□ -1.61
RB1P06400 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5□□□□□ -1.61
RB1P06400 AC010329.2-201ENST00000595195 2737 ntBASIC5□□□□□ -1.61
RB1P06400 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5□□□□□ -1.61
RB1P06400 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5□□□□□ -1.61
RB1P06400 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RB1P06400 AC069282.1-201ENST00000411911 526 ntBASIC5□□□□□ -1.61
RB1P06400 TCEA1P4-201ENST00000415066 844 ntBASIC5□□□□□ -1.61
RB1P06400 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5□□□□□ -1.61
RB1P06400 SLC4A1APP1-201ENST00000419995 602 ntBASIC5□□□□□ -1.61
RB1P06400 ETF1P3-201ENST00000430422 1160 ntBASIC5□□□□□ -1.61
RB1P06400 FTH1P16-201ENST00000435241 552 ntBASIC5□□□□□ -1.61
RB1P06400 MED6P1-201ENST00000439659 713 ntBASIC5□□□□□ -1.61
RB1P06400 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5□□□□□ -1.61
RB1P06400 PTMAP3-201ENST00000447474 330 ntBASIC5□□□□□ -1.61
RB1P06400 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5□□□□□ -1.61
RB1P06400 NUTF2P3-201ENST00000448540 384 ntBASIC5□□□□□ -1.61
RB1P06400 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5□□□□□ -1.61
RB1P06400 AC104763.1-201ENST00000475274 360 ntBASIC5□□□□□ -1.61
RB1P06400 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RB1P06400 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms