Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AP000255.1-201ENST00000610276 676 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 AC023043.4-201ENST00000612081 449 ntBASIC4.07□□□□□ -1.76
HLA-DQB2P05538 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HLA-DQB2P05538 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 CASC19-261ENST00000641853 1638 ntBASIC4.06□□□□□ -1.76
HLA-DQB2P05538 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 MAPK10-253ENST00000641010 4072 ntBASIC4.06□□□□□ -1.76
HLA-DQB2P05538 SNORA70.2-201ENST00000364506 135 ntBASIC4.06□□□□□ -1.76
HLA-DQB2P05538 RNU1-13P-201ENST00000384499 162 ntBASIC4.06□□□□□ -1.76
HLA-DQB2P05538 MT-RNR1-201ENST00000389680 954 ntBASIC4.06□□□□□ -1.76
HLA-DQB2P05538 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 AL691449.1-201ENST00000426570 421 ntBASIC4.06□□□□□ -1.76
HLA-DQB2P05538 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 TPTE2P3-201ENST00000441562 1189 ntBASIC4.06□□□□□ -1.76
HLA-DQB2P05538 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 RPL5P30-201ENST00000465511 891 ntBASIC4.06□□□□□ -1.76
HLA-DQB2P05538 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 RN7SL271P-201ENST00000487601 295 ntBASIC4.06□□□□□ -1.76
HLA-DQB2P05538 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 AC015722.2-201ENST00000622210 551 ntBASIC4.06□□□□□ -1.76
HLA-DQB2P05538 AC124312.6-202ENST00000623624 418 ntBASIC4.06□□□□□ -1.76
HLA-DQB2P05538 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 MTND5P23-201ENST00000430812 1655 ntBASIC4.06□□□□□ -1.76
HLA-DQB2P05538 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HLA-DQB2P05538 MTCO1P22-201ENST00000604619 1360 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 MIR448-201ENST00000362131 111 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 LAP3P1-201ENST00000403648 294 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 MIR1251-201ENST00000408552 70 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AC011742.1-201ENST00000431448 434 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 OR4C10P-201ENST00000434991 931 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 SNRPFP2-201ENST00000440710 251 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AL353748.1-201ENST00000440753 474 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AC114755.5-201ENST00000447760 831 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 RN7SL385P-201ENST00000468873 276 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AC113430.1-201ENST00000506872 718 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AL137072.1-201ENST00000603444 466 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AC128687.2-201ENST00000609657 566 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 AC112484.5-201ENST00000624189 228 ntBASIC4.05□□□□□ -1.76
HLA-DQB2P05538 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.05□□□□□ -1.76
HLA-DQB2P05538 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.04□□□□□ -1.76
HLA-DQB2P05538 MIR372-201ENST00000362225 67 ntBASIC4.04□□□□□ -1.76
HLA-DQB2P05538 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 RNA5SP104-201ENST00000410989 118 ntBASIC4.04□□□□□ -1.76
HLA-DQB2P05538 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 AC013470.3-201ENST00000420252 1194 ntBASIC4.04□□□□□ -1.76
HLA-DQB2P05538 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 AC010469.1-201ENST00000463864 576 ntBASIC4.04□□□□□ -1.76
HLA-DQB2P05538 AC025445.1-201ENST00000502728 300 ntBASIC4.04□□□□□ -1.76
HLA-DQB2P05538 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms