Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.67□□□□□ -1.66
LDLRP01130 AC124283.4-201ENST00000581815 456 ntBASIC4.67□□□□□ -1.66
LDLRP01130 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.67□□□□□ -1.66
LDLRP01130 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.67□□□□□ -1.66
LDLRP01130 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.67□□□□□ -1.66
LDLRP01130 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LDLRP01130 MAPK10-349ENST00000641767 3661 ntBASIC4.67□□□□□ -1.66
LDLRP01130 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LDLRP01130 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.67□□□□□ -1.66
LDLRP01130 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LDLRP01130 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LDLRP01130 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LDLRP01130 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.66□□□□□ -1.66
LDLRP01130 HSPD1P11-201ENST00000508643 1702 ntBASIC4.66□□□□□ -1.66
LDLRP01130 MAPK10-303ENST00000641324 3959 ntBASIC4.66□□□□□ -1.66
LDLRP01130 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.66□□□□□ -1.66
LDLRP01130 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LDLRP01130 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
LDLRP01130 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LDLRP01130 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LDLRP01130 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
LDLRP01130 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LDLRP01130 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LDLRP01130 RNU1-83P-201ENST00000363426 164 ntBASIC4.66□□□□□ -1.66
LDLRP01130 SNORD56.4-201ENST00000363883 71 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AP002784.2-201ENST00000397300 549 ntBASIC4.66□□□□□ -1.66
LDLRP01130 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.66□□□□□ -1.66
LDLRP01130 UBE2V1P11-201ENST00000411559 285 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC105402.1-201ENST00000413336 545 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC073136.2-201ENST00000417282 849 ntBASIC4.66□□□□□ -1.66
LDLRP01130 LINC01347-201ENST00000417964 355 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.66□□□□□ -1.66
LDLRP01130 E2F6P2-201ENST00000420708 748 ntBASIC4.66□□□□□ -1.66
LDLRP01130 DEFB130D-201ENST00000426866 237 ntBASIC4.66□□□□□ -1.66
LDLRP01130 RPS4XP16-201ENST00000427198 791 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.66□□□□□ -1.66
LDLRP01130 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.66□□□□□ -1.66
LDLRP01130 ARL4AP3-201ENST00000441452 574 ntBASIC4.66□□□□□ -1.66
LDLRP01130 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.66□□□□□ -1.66
LDLRP01130 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.66□□□□□ -1.66
LDLRP01130 AC097499.1-201ENST00000444277 208 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.66□□□□□ -1.66
LDLRP01130 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.66□□□□□ -1.66
LDLRP01130 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.66□□□□□ -1.66
LDLRP01130 RPS17P2-201ENST00000461663 408 ntBASIC4.66□□□□□ -1.66
LDLRP01130 RN7SL517P-201ENST00000462240 305 ntBASIC4.66□□□□□ -1.66
LDLRP01130 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.66□□□□□ -1.66
LDLRP01130 AL161747.1-201ENST00000480068 358 ntBASIC4.66□□□□□ -1.66
LDLRP01130 NIP7P2-201ENST00000485801 544 ntBASIC4.66□□□□□ -1.66
LDLRP01130 HMGN2P25-201ENST00000486956 268 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC026979.1-201ENST00000492525 396 ntBASIC4.66□□□□□ -1.66
LDLRP01130 TPT1P3-201ENST00000492841 512 ntBASIC4.66□□□□□ -1.66
LDLRP01130 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.66□□□□□ -1.66
LDLRP01130 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.66□□□□□ -1.66
LDLRP01130 TRAV31-201ENST00000502780 342 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC140172.1-201ENST00000502928 141 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LDLRP01130 HMGB1P19-201ENST00000517578 577 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC134698.5-201ENST00000519444 336 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.66□□□□□ -1.66
LDLRP01130 NPM1P35-201ENST00000533043 868 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC139103.1-201ENST00000534696 1030 ntBASIC4.66□□□□□ -1.66
LDLRP01130 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LDLRP01130 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
LDLRP01130 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
LDLRP01130 AL109741.3-201ENST00000561748 592 ntBASIC4.66□□□□□ -1.66
LDLRP01130 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.66□□□□□ -1.66
LDLRP01130 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.66□□□□□ -1.66
LDLRP01130 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.66□□□□□ -1.66
LDLRP01130 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.66□□□□□ -1.66
LDLRP01130 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.66□□□□□ -1.66
LDLRP01130 AC011492.1-201ENST00000600023 315 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AL020997.2-201ENST00000602607 184 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC112503.1-201ENST00000608436 391 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC019193.2-201ENST00000610012 634 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AL627230.1-201ENST00000613077 211 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AL591926.8-201ENST00000616876 211 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC131238.1-201ENST00000617135 328 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC234782.5-201ENST00000617723 324 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.66□□□□□ -1.66
LDLRP01130 AC126544.2-201ENST00000625174 749 ntBASIC4.66□□□□□ -1.66
LDLRP01130 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LDLRP01130 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LDLRP01130 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LDLRP01130 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LDLRP01130 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.66□□□□□ -1.66
LDLRP01130 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
LDLRP01130 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LDLRP01130 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LDLRP01130 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.65□□□□□ -1.66
LDLRP01130 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LDLRP01130 AC009643.2-201ENST00000603543 1448 ntBASIC4.65□□□□□ -1.66
LDLRP01130 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
LDLRP01130 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LDLRP01130 IL6STP1-201ENST00000346911 1020 ntBASIC4.65□□□□□ -1.67
LDLRP01130 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms