Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.45□□□□□ -1.7
SSX4O60224 SNORA51.8-201ENST00000384234 132 ntBASIC4.45□□□□□ -1.7
SSX4O60224 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SSX4O60224 SNORA11C-201ENST00000408532 129 ntBASIC4.45□□□□□ -1.7
SSX4O60224 RNA5SP146-201ENST00000410743 123 ntBASIC4.45□□□□□ -1.7
SSX4O60224 RNU2-6P-201ENST00000411404 190 ntBASIC4.45□□□□□ -1.7
SSX4O60224 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.45□□□□□ -1.7
SSX4O60224 AC106883.1-201ENST00000418805 562 ntBASIC4.45□□□□□ -1.7
SSX4O60224 AC114814.2-201ENST00000419195 485 ntBASIC4.45□□□□□ -1.7
SSX4O60224 MTCO2P23-201ENST00000425216 680 ntBASIC4.45□□□□□ -1.7
SSX4O60224 ELOCP6-201ENST00000429066 328 ntBASIC4.45□□□□□ -1.7
SSX4O60224 AL049745.1-201ENST00000433953 286 ntBASIC4.45□□□□□ -1.7
SSX4O60224 HMGB3P9-201ENST00000441799 583 ntBASIC4.45□□□□□ -1.7
SSX4O60224 H2AFZP6-201ENST00000444403 394 ntBASIC4.45□□□□□ -1.7
SSX4O60224 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX4O60224 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.45□□□□□ -1.7
SSX4O60224 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SSX4O60224 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.45□□□□□ -1.7
SSX4O60224 RPL7P32-201ENST00000457119 744 ntBASIC4.45□□□□□ -1.7
SSX4O60224 ELOCP12-201ENST00000458706 328 ntBASIC4.45□□□□□ -1.7
SSX4O60224 RPS3AP41-201ENST00000462701 778 ntBASIC4.45□□□□□ -1.7
SSX4O60224 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.45□□□□□ -1.7
SSX4O60224 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.45□□□□□ -1.7
SSX4O60224 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.45□□□□□ -1.7
SSX4O60224 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.45□□□□□ -1.7
SSX4O60224 TCP11X3P-202ENST00000514289 1254 ntBASIC4.45□□□□□ -1.7
SSX4O60224 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.45□□□□□ -1.7
SSX4O60224 AC091163.3-201ENST00000518269 1144 ntBASIC4.45□□□□□ -1.7
SSX4O60224 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX4O60224 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSX4O60224 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.45□□□□□ -1.7
SSX4O60224 RN7SL339P-201ENST00000580597 296 ntBASIC4.45□□□□□ -1.7
SSX4O60224 AC233280.2-201ENST00000603917 1070 ntBASIC4.45□□□□□ -1.7
SSX4O60224 AC073387.2-201ENST00000604797 784 ntBASIC4.45□□□□□ -1.7
SSX4O60224 AC005084.1-201ENST00000605160 304 ntBASIC4.45□□□□□ -1.7
SSX4O60224 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.45□□□□□ -1.7
SSX4O60224 AC093799.2-201ENST00000610062 578 ntBASIC4.45□□□□□ -1.7
SSX4O60224 AC116447.1-201ENST00000613153 453 ntBASIC4.45□□□□□ -1.7
SSX4O60224 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.45□□□□□ -1.7
SSX4O60224 AC005086.4-201ENST00000623065 213 ntBASIC4.45□□□□□ -1.7
SSX4O60224 AC091905.4-201ENST00000623432 202 ntBASIC4.45□□□□□ -1.7
SSX4O60224 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
SSX4O60224 AC017104.5-201ENST00000637647 639 ntBASIC4.45□□□□□ -1.7
SSX4O60224 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.45□□□□□ -1.7
SSX4O60224 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.45□□□□□ -1.7
SSX4O60224 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.45□□□□□ -1.7
SSX4O60224 PANDAR-201ENST00000629595 1506 ntBASIC4.45□□□□□ -1.7
SSX4O60224 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSX4O60224 AC090017.1-201ENST00000548612 1779 ntBASIC4.45□□□□□ -1.7
SSX4O60224 AC017104.4-201ENST00000636283 1592 ntBASIC4.44□□□□□ -1.7
SSX4O60224 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSX4O60224 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX4O60224 MAPK10-320ENST00000641462 6696 ntBASIC4.44□□□□□ -1.7
SSX4O60224 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX4O60224 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SSX4O60224 SNURFL-201ENST00000309296 343 ntBASIC4.44□□□□□ -1.7
SSX4O60224 OR52E6-202ENST00000379946 954 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC136624.1-201ENST00000400791 413 ntBASIC4.44□□□□□ -1.7
SSX4O60224 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSX4O60224 AL390316.1-201ENST00000406279 553 ntBASIC4.44□□□□□ -1.7
SSX4O60224 RNU6-584P-201ENST00000410350 95 ntBASIC4.44□□□□□ -1.7
SSX4O60224 RNU6-603P-201ENST00000411403 107 ntBASIC4.44□□□□□ -1.7
SSX4O60224 GSTM3P2-201ENST00000412746 530 ntBASIC4.44□□□□□ -1.7
SSX4O60224 GJA6P-201ENST00000415117 1042 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC073136.2-201ENST00000417282 849 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC234782.4-201ENST00000417646 1048 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC009965.2-201ENST00000425328 970 ntBASIC4.44□□□□□ -1.7
SSX4O60224 NIPA2P1-201ENST00000426223 976 ntBASIC4.44□□□□□ -1.7
SSX4O60224 RPS26P47-201ENST00000427219 348 ntBASIC4.44□□□□□ -1.7
SSX4O60224 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX4O60224 AC002542.1-201ENST00000440683 193 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC092809.1-201ENST00000441469 474 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX4O60224 RPS3AP53-201ENST00000454716 778 ntBASIC4.44□□□□□ -1.7
SSX4O60224 RPL23AP37-201ENST00000479658 549 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC007686.1-201ENST00000488511 463 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.44□□□□□ -1.7
SSX4O60224 AC098799.3-201ENST00000506095 438 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.44□□□□□ -1.7
SSX4O60224 AC119751.1-201ENST00000513357 765 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX4O60224 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX4O60224 RNA5SP360-201ENST00000516555 118 ntBASIC4.44□□□□□ -1.7
SSX4O60224 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.44□□□□□ -1.7
SSX4O60224 COX6B1P6-201ENST00000522347 255 ntBASIC4.44□□□□□ -1.7
SSX4O60224 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SSX4O60224 OR8I1P-201ENST00000529291 931 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC087897.1-201ENST00000550134 156 ntBASIC4.44□□□□□ -1.7
SSX4O60224 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX4O60224 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.44□□□□□ -1.7
SSX4O60224 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX4O60224 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX4O60224 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.44□□□□□ -1.7
SSX4O60224 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.44□□□□□ -1.7
SSX4O60224 AC011487.3-201ENST00000593607 453 ntBASIC4.44□□□□□ -1.7
SSX4O60224 NTAN1P1-201ENST00000603150 646 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AL162431.4-201ENST00000604674 411 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AL050303.3-201ENST00000613704 284 ntBASIC4.44□□□□□ -1.7
SSX4O60224 AC023509.5-201ENST00000617434 807 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms