Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.16□□□□□ -1.58
PROM1O43490 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PROM1O43490 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.16□□□□□ -1.58
PROM1O43490 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PROM1O43490 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PROM1O43490 RN7SKP124-201ENST00000364730 341 ntBASIC5.16□□□□□ -1.58
PROM1O43490 SNORA70-201ENST00000384436 135 ntBASIC5.16□□□□□ -1.58
PROM1O43490 SNORD56.6-201ENST00000384569 71 ntBASIC5.16□□□□□ -1.58
PROM1O43490 RNU6-178P-201ENST00000384631 104 ntBASIC5.16□□□□□ -1.58
PROM1O43490 DPPA2P3-201ENST00000411853 655 ntBASIC5.16□□□□□ -1.58
PROM1O43490 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.16□□□□□ -1.58
PROM1O43490 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.16□□□□□ -1.58
PROM1O43490 CNOT7P1-201ENST00000429006 852 ntBASIC5.16□□□□□ -1.58
PROM1O43490 RPS27P18-201ENST00000431701 247 ntBASIC5.16□□□□□ -1.58
PROM1O43490 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.16□□□□□ -1.58
PROM1O43490 ATP5F1P1-201ENST00000433775 569 ntBASIC5.16□□□□□ -1.58
PROM1O43490 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.16□□□□□ -1.58
PROM1O43490 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.16□□□□□ -1.58
PROM1O43490 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.16□□□□□ -1.58
PROM1O43490 RHEBP2-201ENST00000450289 600 ntBASIC5.16□□□□□ -1.58
PROM1O43490 RPL21P134-201ENST00000453468 483 ntBASIC5.16□□□□□ -1.58
PROM1O43490 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.16□□□□□ -1.58
PROM1O43490 AL133445.1-201ENST00000467051 452 ntBASIC5.16□□□□□ -1.58
PROM1O43490 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.16□□□□□ -1.58
PROM1O43490 RPL21P6-201ENST00000479171 504 ntBASIC5.16□□□□□ -1.58
PROM1O43490 AC023424.1-201ENST00000496058 459 ntBASIC5.16□□□□□ -1.58
PROM1O43490 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.16□□□□□ -1.58
PROM1O43490 MTND6P2-201ENST00000512226 524 ntBASIC5.16□□□□□ -1.58
PROM1O43490 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.16□□□□□ -1.58
PROM1O43490 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.16□□□□□ -1.58
PROM1O43490 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.16□□□□□ -1.58
PROM1O43490 OR8A2P-201ENST00000528631 952 ntBASIC5.16□□□□□ -1.58
PROM1O43490 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PROM1O43490 UBE2NP1-201ENST00000545592 458 ntBASIC5.16□□□□□ -1.58
PROM1O43490 LSM3P2-201ENST00000551246 273 ntBASIC5.16□□□□□ -1.58
PROM1O43490 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.16□□□□□ -1.58
PROM1O43490 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.16□□□□□ -1.58
PROM1O43490 AC125494.3-201ENST00000602759 455 ntBASIC5.16□□□□□ -1.58
PROM1O43490 AC004223.4-201ENST00000612426 332 ntBASIC5.16□□□□□ -1.58
PROM1O43490 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.16□□□□□ -1.58
PROM1O43490 AC024595.1-201ENST00000623088 387 ntBASIC5.16□□□□□ -1.58
PROM1O43490 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.16□□□□□ -1.58
PROM1O43490 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PROM1O43490 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PROM1O43490 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.16□□□□□ -1.58
PROM1O43490 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
PROM1O43490 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
PROM1O43490 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.16□□□□□ -1.58
PROM1O43490 AL360270.2-201ENST00000562952 5985 ntBASIC5.16□□□□□ -1.58
PROM1O43490 AP005901.5-201ENST00000545779 1796 ntBASIC5.16□□□□□ -1.58
PROM1O43490 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.16□□□□□ -1.58
PROM1O43490 ABCC13-202ENST00000463099 3842 ntBASIC5.16□□□□□ -1.58
PROM1O43490 AC011755.1-201ENST00000623763 2049 ntBASIC5.16□□□□□ -1.58
PROM1O43490 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PROM1O43490 AL031595.2-201ENST00000624215 19071 ntBASIC5.16□□□□□ -1.58
PROM1O43490 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PROM1O43490 CASC19-248ENST00000641674 1356 ntBASIC5.16□□□□□ -1.58
PROM1O43490 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PROM1O43490 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PROM1O43490 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
PROM1O43490 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PROM1O43490 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PROM1O43490 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PROM1O43490 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PROM1O43490 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PROM1O43490 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PROM1O43490 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PROM1O43490 AP000776.1-201ENST00000530032 1663 ntBASIC5.15□□□□□ -1.58
PROM1O43490 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
PROM1O43490 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PROM1O43490 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
PROM1O43490 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PROM1O43490 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PROM1O43490 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.15□□□□□ -1.58
PROM1O43490 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PROM1O43490 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.15□□□□□ -1.58
PROM1O43490 RNU6-543P-201ENST00000362576 108 ntBASIC5.15□□□□□ -1.59
PROM1O43490 RNU6-560P-201ENST00000364007 108 ntBASIC5.15□□□□□ -1.59
PROM1O43490 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PROM1O43490 SNORA16A-201ENST00000384342 137 ntBASIC5.15□□□□□ -1.59
PROM1O43490 SNORA68.2-201ENST00000391263 128 ntBASIC5.15□□□□□ -1.59
PROM1O43490 PPIAP9-201ENST00000403866 498 ntBASIC5.15□□□□□ -1.59
PROM1O43490 NCSTNP1-201ENST00000406229 144 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.15□□□□□ -1.59
PROM1O43490 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.15□□□□□ -1.59
PROM1O43490 PAICSP7-201ENST00000419829 962 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.15□□□□□ -1.59
PROM1O43490 AC009784.1-201ENST00000426484 460 ntBASIC5.15□□□□□ -1.59
PROM1O43490 MTCO1P3-201ENST00000429327 192 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AC124944.2-201ENST00000429866 1242 ntBASIC5.15□□□□□ -1.59
PROM1O43490 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.15□□□□□ -1.59
PROM1O43490 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.15□□□□□ -1.59
PROM1O43490 AC012075.1-201ENST00000436549 580 ntBASIC5.15□□□□□ -1.59
PROM1O43490 PTMAP6-201ENST00000439110 327 ntBASIC5.15□□□□□ -1.59
PROM1O43490 GTF3AP5-201ENST00000442645 697 ntBASIC5.15□□□□□ -1.59
PROM1O43490 MTCYBP3-201ENST00000445588 1137 ntBASIC5.15□□□□□ -1.59
PROM1O43490 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.15□□□□□ -1.59
PROM1O43490 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.15□□□□□ -1.59
PROM1O43490 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.15□□□□□ -1.59
PROM1O43490 AP000936.2-201ENST00000447151 681 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms