Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PHGDHO43175 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.22□□□□□ -1.57
PHGDHO43175 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.22□□□□□ -1.57
PHGDHO43175 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.22□□□□□ -1.57
PHGDHO43175 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PHGDHO43175 AC125611.1-201ENST00000549563 229 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 SERPINE4P-201ENST00000554978 281 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.22□□□□□ -1.57
PHGDHO43175 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.22□□□□□ -1.57
PHGDHO43175 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.22□□□□□ -1.57
PHGDHO43175 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.22□□□□□ -1.57
PHGDHO43175 RN7SL708P-201ENST00000580952 299 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 MIR4472-2-201ENST00000582069 67 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.22□□□□□ -1.57
PHGDHO43175 AC017100.2-201ENST00000584628 355 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.22□□□□□ -1.57
PHGDHO43175 AC008687.2-201ENST00000597865 520 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC006539.2-201ENST00000601729 572 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 FO393422.1-201ENST00000603908 708 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC069304.3-201ENST00000603938 1084 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC133552.5-201ENST00000604266 540 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC106791.2-201ENST00000604680 391 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC009163.6-201ENST00000612367 342 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 RN7SL787P-201ENST00000613000 284 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AL139418.1-201ENST00000613613 177 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC009318.3-201ENST00000616916 503 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.22□□□□□ -1.57
PHGDHO43175 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.22□□□□□ -1.57
PHGDHO43175 SAMMSON-227ENST00000642114 1199 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.22□□□□□ -1.57
PHGDHO43175 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.22□□□□□ -1.57
PHGDHO43175 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 AC093591.2-201ENST00000565254 3843 ntBASIC5.22□□□□□ -1.57
PHGDHO43175 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.22□□□□□ -1.57
PHGDHO43175 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PHGDHO43175 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.57
PHGDHO43175 AC063976.2-201ENST00000425667 3556 ntBASIC5.21□□□□□ -1.57
PHGDHO43175 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.21□□□□□ -1.57
PHGDHO43175 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
PHGDHO43175 AL034370.1-201ENST00000397254 1590 ntBASIC5.21□□□□□ -1.57
PHGDHO43175 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PHGDHO43175 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.21□□□□□ -1.58
PHGDHO43175 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PHGDHO43175 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PHGDHO43175 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 RNU6-492P-201ENST00000363035 104 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 RNA5SP335-201ENST00000363817 110 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 RNA5SP223-201ENST00000365174 120 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.21□□□□□ -1.58
PHGDHO43175 MIR105-1-201ENST00000385222 81 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
PHGDHO43175 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PHGDHO43175 NCSTNP1-201ENST00000406229 144 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 RN7SKP16-201ENST00000410180 299 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 AC211486.3-201ENST00000412694 621 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AC009302.1-201ENST00000417147 390 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 BOLA3P4-201ENST00000418151 400 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AC098592.1-201ENST00000419352 333 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AL365203.2-201ENST00000423444 196 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.21□□□□□ -1.58
PHGDHO43175 AL050321.1-201ENST00000432363 400 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.21□□□□□ -1.58
PHGDHO43175 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.21□□□□□ -1.58
PHGDHO43175 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.21□□□□□ -1.58
PHGDHO43175 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.21□□□□□ -1.58
PHGDHO43175 AC012512.1-201ENST00000446594 718 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.21□□□□□ -1.58
PHGDHO43175 RPL12P26-201ENST00000452430 487 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 NDUFA5P7-201ENST00000452914 242 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 DNAJB5P1-201ENST00000454004 806 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.21□□□□□ -1.58
PHGDHO43175 NF1P3-201ENST00000457709 450 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AC079168.1-201ENST00000458741 345 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AC021660.1-201ENST00000465006 554 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 RN7SL189P-201ENST00000468631 289 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PHGDHO43175 AC126121.1-201ENST00000482313 553 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.21□□□□□ -1.58
PHGDHO43175 SETP14-201ENST00000497538 873 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PHGDHO43175 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 RNU6-202P-201ENST00000515998 96 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AC105185.1-201ENST00000518705 535 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.21□□□□□ -1.58
PHGDHO43175 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.21□□□□□ -1.58
PHGDHO43175 AL356057.1-201ENST00000533798 831 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.21□□□□□ -1.58
PHGDHO43175 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.21□□□□□ -1.58
PHGDHO43175 AC116553.2-201ENST00000564203 463 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 AC093519.1-201ENST00000566109 298 ntBASIC5.21□□□□□ -1.58
PHGDHO43175 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PHGDHO43175 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.21□□□□□ -1.58
PHGDHO43175 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms