Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.37□□□□□ -1.71
CEP290O15078 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CEP290O15078 AL449283.1-201ENST00000602631 3403 ntBASIC4.37□□□□□ -1.71
CEP290O15078 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CEP290O15078 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CEP290O15078 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CEP290O15078 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.37□□□□□ -1.71
CEP290O15078 UBE2V1P2-201ENST00000397758 440 ntBASIC4.37□□□□□ -1.71
CEP290O15078 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.37□□□□□ -1.71
CEP290O15078 MTND2P40-201ENST00000436718 841 ntBASIC4.37□□□□□ -1.71
CEP290O15078 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.37□□□□□ -1.71
CEP290O15078 VN1R32P-201ENST00000452234 905 ntBASIC4.37□□□□□ -1.71
CEP290O15078 TMED11P-201ENST00000479478 690 ntBASIC4.37□□□□□ -1.71
CEP290O15078 AC139783.2-201ENST00000504847 1145 ntBASIC4.37□□□□□ -1.71
CEP290O15078 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.37□□□□□ -1.71
CEP290O15078 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.37□□□□□ -1.71
CEP290O15078 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.37□□□□□ -1.71
CEP290O15078 AP001284.1-201ENST00000528393 2118 ntBASIC4.37□□□□□ -1.71
CEP290O15078 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC4.37□□□□□ -1.71
CEP290O15078 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.37□□□□□ -1.71
CEP290O15078 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CEP290O15078 MTCO1P24-201ENST00000515438 1558 ntBASIC4.37□□□□□ -1.71
CEP290O15078 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CEP290O15078 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CEP290O15078 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CEP290O15078 HMGB3P19-201ENST00000403971 560 ntBASIC4.36□□□□□ -1.71
CEP290O15078 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.36□□□□□ -1.71
CEP290O15078 S100A11P2-201ENST00000467589 312 ntBASIC4.36□□□□□ -1.71
CEP290O15078 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CEP290O15078 AC124068.1-201ENST00000563131 678 ntBASIC4.36□□□□□ -1.71
CEP290O15078 RPL23AP97-201ENST00000568955 471 ntBASIC4.36□□□□□ -1.71
CEP290O15078 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.36□□□□□ -1.71
CEP290O15078 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CEP290O15078 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CEP290O15078 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CEP290O15078 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CEP290O15078 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CEP290O15078 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.36□□□□□ -1.71
CEP290O15078 MIR1251-201ENST00000408552 70 ntBASIC4.36□□□□□ -1.71
CEP290O15078 TRIM60P17-201ENST00000415181 719 ntBASIC4.36□□□□□ -1.71
CEP290O15078 RPL35AP21-201ENST00000437667 333 ntBASIC4.36□□□□□ -1.71
CEP290O15078 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.36□□□□□ -1.71
CEP290O15078 MRPL35P4-201ENST00000453682 566 ntBASIC4.36□□□□□ -1.71
CEP290O15078 RN7SL504P-201ENST00000494496 287 ntBASIC4.36□□□□□ -1.71
CEP290O15078 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.36□□□□□ -1.71
CEP290O15078 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CEP290O15078 EOGT-210ENST00000615922 1931 ntBASIC4.36□□□□□ -1.71
CEP290O15078 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CEP290O15078 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC4.36□□□□□ -1.71
CEP290O15078 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CEP290O15078 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CEP290O15078 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CEP290O15078 AP002512.4-202ENST00000641599 4530 ntBASIC4.36□□□□□ -1.71
CEP290O15078 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.35□□□□□ -1.71
CEP290O15078 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
CEP290O15078 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CEP290O15078 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
CEP290O15078 IL6STP1-201ENST00000346911 1020 ntBASIC4.35□□□□□ -1.71
CEP290O15078 RNA5SP151-201ENST00000365632 117 ntBASIC4.35□□□□□ -1.71
CEP290O15078 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.35□□□□□ -1.71
CEP290O15078 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.35□□□□□ -1.71
CEP290O15078 CEACAMP1-201ENST00000434624 1035 ntBASIC4.35□□□□□ -1.71
CEP290O15078 AL591503.2-201ENST00000442314 1005 ntBASIC4.35□□□□□ -1.71
CEP290O15078 SETP14-201ENST00000497538 873 ntBASIC4.35□□□□□ -1.71
CEP290O15078 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.35□□□□□ -1.71
CEP290O15078 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.35□□□□□ -1.71
CEP290O15078 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.35□□□□□ -1.71
CEP290O15078 MIR4769-201ENST00000584126 77 ntBASIC4.35□□□□□ -1.71
CEP290O15078 AC020914.6-201ENST00000594327 272 ntBASIC4.35□□□□□ -1.71
CEP290O15078 MIR7112-201ENST00000616126 65 ntBASIC4.35□□□□□ -1.71
CEP290O15078 AL713922.2-201ENST00000619384 716 ntBASIC4.35□□□□□ -1.71
CEP290O15078 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.35□□□□□ -1.71
CEP290O15078 MAPK10-328ENST00000641553 4009 ntBASIC4.35□□□□□ -1.71
CEP290O15078 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CEP290O15078 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CEP290O15078 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CEP290O15078 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CEP290O15078 RNA5SP97-201ENST00000365006 84 ntBASIC4.35□□□□□ -1.71
CEP290O15078 AC007066.1-201ENST00000392902 381 ntBASIC4.35□□□□□ -1.71
CEP290O15078 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.35□□□□□ -1.71
CEP290O15078 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.35□□□□□ -1.71
CEP290O15078 RPS4XP4-201ENST00000443195 763 ntBASIC4.35□□□□□ -1.71
CEP290O15078 AC005726.1-201ENST00000494679 427 ntBASIC4.35□□□□□ -1.71
CEP290O15078 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CEP290O15078 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.35□□□□□ -1.71
CEP290O15078 AP002360.3-201ENST00000607673 710 ntBASIC4.35□□□□□ -1.71
CEP290O15078 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.35□□□□□ -1.71
CEP290O15078 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CEP290O15078 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.35□□□□□ -1.71
CEP290O15078 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.35□□□□□ -1.71
CEP290O15078 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CEP290O15078 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.35□□□□□ -1.71
CEP290O15078 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.34□□□□□ -1.71
CEP290O15078 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CEP290O15078 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CEP290O15078 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CEP290O15078 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.34□□□□□ -1.71
CEP290O15078 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.34□□□□□ -1.71
CEP290O15078 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.34□□□□□ -1.71
CEP290O15078 SNORA70.9-201ENST00000384370 135 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms