Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC115286.1-201ENST00000604298 434 ntBASIC4.79□□□□□ -1.64
O00370 AL133445.2-201ENST00000611191 527 ntBASIC4.79□□□□□ -1.64
O00370 MIR6798-201ENST00000612887 67 ntBASIC4.79□□□□□ -1.64
O00370 AC131238.1-201ENST00000617135 328 ntBASIC4.79□□□□□ -1.64
O00370 uc_338.9-201ENST00000617424 182 ntBASIC4.79□□□□□ -1.64
O00370 AP000346.3-201ENST00000622821 210 ntBASIC4.79□□□□□ -1.64
O00370 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.79□□□□□ -1.64
O00370 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
O00370 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
O00370 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
O00370 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
O00370 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
O00370 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
O00370 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
O00370 AC006971.1-201ENST00000407916 4486 ntBASIC4.78□□□□□ -1.64
O00370 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
O00370 AC139769.1-204ENST00000472297 1931 ntBASIC4.78□□□□□ -1.64
O00370 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
O00370 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.78□□□□□ -1.64
O00370 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.78□□□□□ -1.64
O00370 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
O00370 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
O00370 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
O00370 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.78□□□□□ -1.64
O00370 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
O00370 AL353692.2-201ENST00000407054 335 ntBASIC4.78□□□□□ -1.64
O00370 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.78□□□□□ -1.64
O00370 RPL26P29-201ENST00000415623 438 ntBASIC4.78□□□□□ -1.64
O00370 RPL12P34-201ENST00000424532 479 ntBASIC4.78□□□□□ -1.64
O00370 RPS12P10-201ENST00000427031 377 ntBASIC4.78□□□□□ -1.64
O00370 NDUFA5P10-201ENST00000432147 357 ntBASIC4.78□□□□□ -1.64
O00370 ELOCP3-201ENST00000439303 348 ntBASIC4.78□□□□□ -1.64
O00370 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
O00370 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.78□□□□□ -1.64
O00370 ARL2BPP10-201ENST00000446487 531 ntBASIC4.78□□□□□ -1.64
O00370 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.78□□□□□ -1.64
O00370 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.78□□□□□ -1.64
O00370 RPL5P30-201ENST00000465511 891 ntBASIC4.78□□□□□ -1.64
O00370 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.78□□□□□ -1.64
O00370 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.78□□□□□ -1.64
O00370 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.78□□□□□ -1.64
O00370 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.78□□□□□ -1.64
O00370 AP000827.1-201ENST00000527814 258 ntBASIC4.78□□□□□ -1.64
O00370 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
O00370 AC027455.1-201ENST00000574104 594 ntBASIC4.78□□□□□ -1.64
O00370 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.78□□□□□ -1.64
O00370 AC005776.1-201ENST00000603164 290 ntBASIC4.78□□□□□ -1.64
O00370 AP004372.1-201ENST00000604842 844 ntBASIC4.78□□□□□ -1.64
O00370 KATNBL1P5-201ENST00000605015 517 ntBASIC4.78□□□□□ -1.64
O00370 BNIP3P19-201ENST00000605397 577 ntBASIC4.78□□□□□ -1.64
O00370 AC008966.2-201ENST00000606157 453 ntBASIC4.78□□□□□ -1.64
O00370 AP002360.3-201ENST00000607673 710 ntBASIC4.78□□□□□ -1.64
O00370 AC025016.1-201ENST00000616746 682 ntBASIC4.78□□□□□ -1.64
O00370 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.78□□□□□ -1.64
O00370 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
O00370 BMS1P21-201ENST00000634565 365 ntBASIC4.78□□□□□ -1.64
O00370 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.78□□□□□ -1.64
O00370 OR2L1P-202ENST00000641567 1023 ntBASIC4.78□□□□□ -1.64
O00370 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
O00370 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
O00370 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.78□□□□□ -1.64
O00370 PHKBP1-201ENST00000450951 1951 ntBASIC4.78□□□□□ -1.64
O00370 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
O00370 AC105074.1-201ENST00000623380 3095 ntBASIC4.78□□□□□ -1.64
O00370 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
O00370 OR56B2P-202ENST00000641377 2453 ntBASIC4.78□□□□□ -1.64
O00370 RAD17P1-201ENST00000418130 2042 ntBASIC4.77□□□□□ -1.65
O00370 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
O00370 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.77□□□□□ -1.65
O00370 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
O00370 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
O00370 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
O00370 MIR448-201ENST00000362131 111 ntBASIC4.77□□□□□ -1.65
O00370 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
O00370 RNU6-31P-201ENST00000384388 108 ntBASIC4.77□□□□□ -1.65
O00370 RNU6-244P-201ENST00000391028 104 ntBASIC4.77□□□□□ -1.65
O00370 GSTM3P2-201ENST00000412746 530 ntBASIC4.77□□□□□ -1.65
O00370 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.77□□□□□ -1.65
O00370 RPL7AP25-201ENST00000423357 805 ntBASIC4.77□□□□□ -1.65
O00370 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.77□□□□□ -1.65
O00370 AC069285.2-201ENST00000440210 275 ntBASIC4.77□□□□□ -1.65
O00370 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.77□□□□□ -1.65
O00370 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.77□□□□□ -1.65
O00370 AC012158.1-204ENST00000483430 465 ntBASIC4.77□□□□□ -1.65
O00370 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.77□□□□□ -1.65
O00370 RPS27AP16-201ENST00000492222 470 ntBASIC4.77□□□□□ -1.65
O00370 AC005912.1-201ENST00000495392 255 ntBASIC4.77□□□□□ -1.65
O00370 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.77□□□□□ -1.65
O00370 OR51K1P-201ENST00000510214 950 ntBASIC4.77□□□□□ -1.65
O00370 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
O00370 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.77□□□□□ -1.65
O00370 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.77□□□□□ -1.65
O00370 RNU6-1102P-201ENST00000516149 96 ntBASIC4.77□□□□□ -1.65
O00370 RNA5SP154-201ENST00000516193 111 ntBASIC4.77□□□□□ -1.65
O00370 RNU6-1308P-201ENST00000516817 103 ntBASIC4.77□□□□□ -1.65
O00370 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.77□□□□□ -1.65
O00370 AC090151.1-201ENST00000520784 730 ntBASIC4.77□□□□□ -1.65
O00370 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.77□□□□□ -1.65
O00370 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.77□□□□□ -1.65
O00370 SS18L2P2-201ENST00000583960 235 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms