Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM1O00151 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.34□□□□□ -1.71
PDLIM1O00151 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.34□□□□□ -1.71
PDLIM1O00151 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM1O00151 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM1O00151 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.34□□□□□ -1.71
PDLIM1O00151 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM1O00151 AP003168.1-201ENST00000530091 307 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM1O00151 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM1O00151 PCNPP1-201ENST00000552501 511 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 EDDM3DP-201ENST00000554692 434 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AC068714.1-201ENST00000559623 800 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 BGLT3-201ENST00000564523 994 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.34□□□□□ -1.71
PDLIM1O00151 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM1O00151 MIR4436B2-201ENST00000581415 91 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 MIR4436B1-201ENST00000583272 91 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AC040174.2-201ENST00000602701 465 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 MTCO3P22-201ENST00000603219 784 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 OR4H6P-202ENST00000603819 340 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AL034351.1-201ENST00000605288 668 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AC008966.2-201ENST00000606157 453 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 CR381572.2-201ENST00000624852 397 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.34□□□□□ -1.71
PDLIM1O00151 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.34□□□□□ -1.71
PDLIM1O00151 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.34□□□□□ -1.71
PDLIM1O00151 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PDLIM1O00151 MAPK10-263ENST00000641052 4307 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM1O00151 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM1O00151 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDLIM1O00151 PHKBP1-201ENST00000450951 1951 ntBASIC4.34□□□□□ -1.71
PDLIM1O00151 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PDLIM1O00151 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM1O00151 AC099654.2-201ENST00000433031 1980 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AL031119.1-201ENST00000404707 1879 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
PDLIM1O00151 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM1O00151 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM1O00151 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
PDLIM1O00151 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM1O00151 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PDLIM1O00151 RNU6-304P-201ENST00000364855 107 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 RNA5SP87-201ENST00000384155 118 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM1O00151 RNU6-603P-201ENST00000411403 107 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM1O00151 RPL7P53-201ENST00000421245 739 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AC007559.1-201ENST00000428736 355 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM1O00151 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM1O00151 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM1O00151 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM1O00151 ELOCP10-201ENST00000440624 327 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.33□□□□□ -1.72
PDLIM1O00151 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM1O00151 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM1O00151 RPS3AP53-201ENST00000454716 778 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM1O00151 AP000926.1-201ENST00000479573 241 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 PPIAP15-201ENST00000479662 484 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM1O00151 HIGD1AP18-201ENST00000520730 278 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM1O00151 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM1O00151 BRD9P1-201ENST00000529855 560 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 NOP56P3-201ENST00000549457 385 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.33□□□□□ -1.72
PDLIM1O00151 AC009117.1-201ENST00000563948 554 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.33□□□□□ -1.72
PDLIM1O00151 AC091178.1-203ENST00000584586 279 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AC005242.1-201ENST00000585658 438 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AC020910.3-201ENST00000603701 874 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AC011453.2-201ENST00000603737 729 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 ELOCP34-201ENST00000604436 327 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AL096803.3-201ENST00000609032 532 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.33□□□□□ -1.72
PDLIM1O00151 U7.8-201ENST00000619968 63 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 AC011815.3-201ENST00000624194 473 ntBASIC4.33□□□□□ -1.72
PDLIM1O00151 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM1O00151 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM1O00151 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDLIM1O00151 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PDLIM1O00151 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.33□□□□□ -1.72
PDLIM1O00151 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM1O00151 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM1O00151 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PDLIM1O00151 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM1O00151 AC053481.2-202ENST00000582394 1500 ntBASIC4.32□□□□□ -1.72
PDLIM1O00151 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM1O00151 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM1O00151 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.32□□□□□ -1.72
PDLIM1O00151 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.32□□□□□ -1.72
PDLIM1O00151 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM1O00151 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
PDLIM1O00151 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM1O00151 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PDLIM1O00151 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms