Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MIR23B-201ENST00000384832 97 ntBASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 BX119904.1-201ENST00000432026 348 ntBASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 OR4C10P-201ENST00000434991 931 ntBASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL132838.2-201ENST00000492041 314 ntBASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 MIR4286-201ENST00000580651 93 ntBASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC022916.3-201ENST00000592961 742 ntBASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC087468.1-201ENST00000604365 630 ntBASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC096553.1-201ENST00000605169 829 ntBASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC090948.2-201ENST00000607363 564 ntBASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL161637.1-201ENST00000622380 412 ntBASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC139769.1-204ENST00000472297 1931 ntBASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
TMX2-CTNND1H3BSU7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 RNA5SP175-201ENST00000364275 119 ntBASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 MIR708-201ENST00000390708 88 ntBASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 RPL6P29-201ENST00000414863 865 ntBASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 RPL7AP52-201ENST00000458096 790 ntBASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 RPS27AP13-201ENST00000498403 237 ntBASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 AP001960.1-201ENST00000506494 658 ntBASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 ATP1B1P1-201ENST00000509767 915 ntBASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 MTCYBP19-201ENST00000517463 1124 ntBASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 FAM27D1-201ENST00000612308 341 ntBASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC026368.1-201ENST00000614934 690 ntBASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 AP002967.1-201ENST00000624203 539 ntBASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.19□□□□□ -1.74
TMX2-CTNND1H3BSU7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 GCNT6-201ENST00000379591 934 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC019155.1-201ENST00000382242 574 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 MIR134-201ENST00000385258 73 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL050305.1-201ENST00000399993 1230 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 RPL36AP36-201ENST00000418616 301 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 ARAFP1-201ENST00000422172 605 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 BTF3P10-201ENST00000433415 495 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 AC091153.1-201ENST00000466297 402 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 RN7SL809P-201ENST00000482040 297 ntBASIC4.18□□□□□ -1.74
TMX2-CTNND1H3BSU7 HNRNPKP5-201ENST00000515300 253 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms