Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 ZNF137P-201ENST00000456718 1920 ntBASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.99□□□□□ -1.61
SNX9Q9Y5X1 AL031119.1-201ENST00000404707 1879 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC092079.1-201ENST00000558620 1985 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC126323.6-202ENST00000568092 3511 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 SNORD113.2-201ENST00000364166 89 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 SNORA71.2-201ENST00000364941 134 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 SNORA56-201ENST00000383966 129 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 RNA5SP397-201ENST00000391323 118 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 GLULP6-201ENST00000399502 913 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 BTF3P9-201ENST00000418784 283 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 TCEA1P2-201ENST00000420496 906 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC245028.1-201ENST00000423259 256 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC044797.1-201ENST00000445744 679 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC008379.1-201ENST00000463655 464 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 MTND4LP2-201ENST00000502312 285 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 NPM1P35-201ENST00000533043 868 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC079075.1-201ENST00000559543 878 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC023825.1-201ENST00000566704 1030 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC008507.2-201ENST00000588402 1176 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC011492.1-201ENST00000600023 315 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 CLIC4P2-201ENST00000601934 717 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC084373.1-201ENST00000603311 235 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC069431.2-201ENST00000604149 1099 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC021851.1-201ENST00000608537 1082 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC015908.5-201ENST00000623289 343 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC092159.4-201ENST00000624944 550 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 Z98755.1-201ENST00000407015 1384 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 AC108467.2-201ENST00000617640 1597 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 SPATA2P1-201ENST00000431223 2055 ntBASIC4.98□□□□□ -1.61
SNX9Q9Y5X1 DHX40P1-201ENST00000588725 1412 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 HSPD1P14-201ENST00000432666 1618 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 RAD1P1-201ENST00000231383 813 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 OR4K15-201ENST00000305051 1216 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 RNA5SP332-201ENST00000391063 115 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 RNU6-796P-201ENST00000391086 107 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 RPS4XP9-201ENST00000405151 780 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AL080315.1-201ENST00000406055 466 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 RN7SKP199-201ENST00000410325 305 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AL590609.2-201ENST00000421430 368 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 FO393414.1-201ENST00000428697 1184 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 MRPL48P1-201ENST00000445390 636 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 ARL2BPP10-201ENST00000446487 531 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC104164.3-201ENST00000467363 1258 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 RN7SL459P-201ENST00000481078 302 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 HMGB1P38-201ENST00000490557 577 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC098799.3-201ENST00000506095 438 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC114322.1-201ENST00000506771 926 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC113430.1-201ENST00000506872 718 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC111000.3-201ENST00000508057 576 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC007016.1-201ENST00000512110 244 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 RN7SKP92-201ENST00000517266 244 ntBASIC4.97□□□□□ -1.61
SNX9Q9Y5X1 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms