Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 RNA5SP512-201ENST00000364550 120 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 PPIAP26-201ENST00000377951 522 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 SNORA51.6-201ENST00000384151 125 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 RNU6-606P-201ENST00000384721 111 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 MIR1-2-201ENST00000384961 85 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 Y_RNA.579-201ENST00000390939 94 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 ARF4P3-201ENST00000397387 509 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 RN7SKP30-201ENST00000411373 334 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC073136.2-201ENST00000417282 849 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 RPS15AP12-201ENST00000419498 388 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 MYB-206ENST00000420123 1051 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 BEND7P1-201ENST00000422058 457 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC007283.2-201ENST00000424739 197 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AL731534.1-201ENST00000434711 269 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 TRAPPC2P8-201ENST00000440676 396 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 Y_RNA.631-201ENST00000459607 101 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 UOX-201ENST00000471089 899 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 TXNP6-201ENST00000510190 310 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 BTF3P13-201ENST00000513224 490 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 SCOCP1-201ENST00000554676 349 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 MTCYBP13-201ENST00000578634 1093 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 RN7SL697P-201ENST00000582484 299 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AL683813.2-201ENST00000605245 502 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC122710.3-201ENST00000606566 541 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AL121782.1-201ENST00000611242 413 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC120057.5-201ENST00000623840 154 ntBASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PCDHGA11Q9Y5H2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 MTND5P16-201ENST00000460269 1703 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 AF287957.1-201ENST00000607368 1595 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 AKAP17BP-201ENST00000431706 2719 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 TUBBP10-201ENST00000427668 1301 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 AL080312.1-201ENST00000256654 824 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 AC073343.1-201ENST00000328239 651 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 RNA5SP65-201ENST00000363166 119 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 RNU6-441P-201ENST00000384545 106 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 SNORD37.1-201ENST00000390968 65 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 SOD1P1-201ENST00000407803 440 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 NPM1P40-201ENST00000412758 733 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 RPL14P5-201ENST00000436474 730 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 AL049734.2-201ENST00000441066 616 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 AL353803.3-201ENST00000444641 335 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 GOT2P2-201ENST00000450663 1251 ntBASIC6.62□□□□□ -1.35
PCDHGA11Q9Y5H2 FGF7P3-201ENST00000454645 303 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms