Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AC004825.1-201ENST00000555068 586 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 MTND4LP24-201ENST00000572277 291 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 MIR744-201ENST00000578242 98 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 MIR4691-201ENST00000583764 85 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AC115085.1-201ENST00000588924 229 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AC093765.1-201ENST00000603758 881 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AC093799.2-201ENST00000610062 578 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AC008115.4-201ENST00000619780 775 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 AL356490.1-201ENST00000623079 479 ntBASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.77□□□□□ -1.81
KCNIP3Q9Y2W7 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 RAD1P1-201ENST00000231383 813 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 RNA5SP151-201ENST00000365632 117 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 U3.30-201ENST00000391308 210 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 TAF9BP2-201ENST00000400856 499 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 OR3A2-201ENST00000408891 1076 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 RPL35AP24-201ENST00000413846 330 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AL513325.1-201ENST00000417716 1034 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 LINC01347-201ENST00000417964 355 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 MTND2P11-201ENST00000423638 648 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 CFL1P1-202ENST00000432948 411 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 RPL7P11-201ENST00000437586 658 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 YWHAZP2-201ENST00000440317 728 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 DDX39BP2-208ENST00000453923 258 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC011037.1-201ENST00000483964 558 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 MRPS33P2-201ENST00000507850 322 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 RN7SKP141-201ENST00000516167 338 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 PHBP17-201ENST00000528576 541 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC004923.2-201ENST00000529649 369 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 CKS1BP1-201ENST00000555221 240 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AL121594.4-201ENST00000556211 1196 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AGGF1P8-201ENST00000562979 1000 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 RN7SL652P-201ENST00000577769 300 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC015911.5-201ENST00000587076 451 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC011374.2-201ENST00000607135 526 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC004477.3-201ENST00000614061 590 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC090617.9-201ENST00000623751 147 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AL118508.4-201ENST00000624142 1176 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 SAMMSON-226ENST00000642089 1582 ntBASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
KCNIP3Q9Y2W7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 METTL21EP-201ENST00000298105 713 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 RNA5SP307-201ENST00000362863 116 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 SNORA74A-201ENST00000364089 198 ntBASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KCNIP3Q9Y2W7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms