Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 GSTM5P1-201ENST00000434751 660 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC092647.3-201ENST00000443044 633 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 EXTL2P1-201ENST00000446218 416 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AL929288.2-201ENST00000446368 407 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 PRPF38AP1-201ENST00000451976 933 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AL389915.2-201ENST00000454576 441 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 RNA5SP103-201ENST00000459503 118 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 RPL7AP10-201ENST00000481016 791 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 MYL12BP2-201ENST00000503948 512 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC091951.3-201ENST00000504093 246 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 HMGB1P44-201ENST00000508597 572 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 Y_RNA.688-201ENST00000516565 95 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AP002373.2-201ENST00000541631 1060 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC005341.1-201ENST00000571086 708 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 MIR4330-201ENST00000579077 105 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC022662.1-201ENST00000580252 331 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 BNIP3P4-201ENST00000604946 565 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AL583856.2-201ENST00000606298 543 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC064807.4-201ENST00000607201 407 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC000068.2-201ENST00000608816 460 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AL360219.1-201ENST00000610230 366 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AL450489.1-201ENST00000612071 468 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 MIR6839-201ENST00000620425 113 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC078883.4-201ENST00000623218 367 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 AC138393.1-206ENST00000540997 1886 ntBASIC5.06□□□□□ -1.6
VPS4AQ9UN37 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
VPS4AQ9UN37 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC005261.4-201ENST00000600047 1385 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AL137100.1-201ENST00000556703 1620 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 RNU1-43P-201ENST00000365052 165 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 RPL12P9-201ENST00000412942 488 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC108075.1-201ENST00000424692 529 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 MOB1AP1-201ENST00000430903 535 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 CDY14P-201ENST00000431260 1014 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AL049745.1-201ENST00000433953 286 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 PSMD10P3-201ENST00000437000 448 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 CDY12P-201ENST00000440679 1015 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 CDY13P-201ENST00000445813 1015 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AL591623.2-201ENST00000449978 222 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 CDY23P-201ENST00000451661 1014 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 NPM1P13-201ENST00000452663 865 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC010486.2-201ENST00000505572 483 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC104108.1-201ENST00000509930 412 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC117522.2-201ENST00000510049 657 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC010486.3-201ENST00000511602 785 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC018442.3-201ENST00000523025 183 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC040958.1-201ENST00000561102 201 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS4AQ9UN37 EIF1P6-201ENST00000600054 334 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AL353778.1-201ENST00000603149 408 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AL392112.1-201ENST00000605115 829 ntBASIC5.05□□□□□ -1.6
VPS4AQ9UN37 AC005084.1-201ENST00000605160 304 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms