Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLCF1Q9UBD9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 HSPD1P14-201ENST00000432666 1618 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AL158163.1-201ENST00000603915 1649 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 MIR383-201ENST00000362257 73 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 SNORA27.3-201ENST00000364937 134 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 RPL26P37-201ENST00000411983 438 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AL353898.1-201ENST00000444055 238 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC105137.1-201ENST00000484355 562 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC010374.1-201ENST00000503762 1237 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 MRPL49P2-201ENST00000521066 465 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 NPM1P6-201ENST00000521088 871 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AL354984.3-201ENST00000604803 325 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC012467.1-201ENST00000607740 256 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC092653.1-201ENST00000608509 531 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC097505.1-201ENST00000610199 565 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AL021997.2-201ENST00000615674 271 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AL023881.1-201ENST00000621088 301 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 AC007546.2-201ENST00000623996 360 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 OR5AC4P-202ENST00000642086 985 ntBASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCF1Q9UBD9 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 OR5T3-201ENST00000303059 1023 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 RN7SKP224-201ENST00000364140 325 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 SNORA70C-201ENST00000384538 135 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AL583835.1-201ENST00000399570 407 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AC097374.1-203ENST00000400783 485 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AL356967.1-201ENST00000406305 431 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 MTND3P20-201ENST00000407663 186 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 NRBF2P2-201ENST00000413087 861 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AL132765.1-201ENST00000434165 553 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 CACYBPP1-201ENST00000438592 684 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 HMGB3P9-201ENST00000441799 583 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 RPS20P4-201ENST00000461659 355 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AC113430.1-201ENST00000506872 718 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 PARP4P3-201ENST00000510265 317 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AC008958.1-201ENST00000511047 682 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 NPM1P35-201ENST00000533043 868 ntBASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCF1Q9UBD9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms