Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNA5SP73-201ENST00000516744 108 ntBASIC3.97□□□□□ -1.77
VAPAQ9P0L0 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.97□□□□□ -1.77
VAPAQ9P0L0 IGLVIV-53-201ENST00000520107 367 ntBASIC3.97□□□□□ -1.77
VAPAQ9P0L0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 AC135001.1-201ENST00000544546 283 ntBASIC3.97□□□□□ -1.77
VAPAQ9P0L0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 AC068790.5-201ENST00000602741 355 ntBASIC3.97□□□□□ -1.77
VAPAQ9P0L0 AC090953.1-201ENST00000604305 1092 ntBASIC3.97□□□□□ -1.77
VAPAQ9P0L0 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 AL133370.2-201ENST00000619934 439 ntBASIC3.97□□□□□ -1.77
VAPAQ9P0L0 MIR4727-201ENST00000622232 55 ntBASIC3.97□□□□□ -1.77
VAPAQ9P0L0 MIR6719-201ENST00000622428 87 ntBASIC3.97□□□□□ -1.77
VAPAQ9P0L0 AC091953.3-201ENST00000623220 236 ntBASIC3.97□□□□□ -1.77
VAPAQ9P0L0 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 AC114546.3-201ENST00000623582 1734 ntBASIC3.97□□□□□ -1.77
VAPAQ9P0L0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 AC006971.1-201ENST00000407916 4486 ntBASIC3.97□□□□□ -1.77
VAPAQ9P0L0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
VAPAQ9P0L0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
VAPAQ9P0L0 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
VAPAQ9P0L0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
VAPAQ9P0L0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 AC092162.3-201ENST00000624511 1624 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 RN7SKP269-201ENST00000365545 319 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 MIR105-2-201ENST00000385083 81 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 AL450992.3-201ENST00000413192 568 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 AC006065.1-201ENST00000422539 802 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 RPL12P34-201ENST00000424532 479 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 SEC63P1-201ENST00000425785 1258 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 AL590762.4-201ENST00000425885 253 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 MTCO1P54-201ENST00000430139 712 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 RPL12P28-201ENST00000430852 489 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 TPTE2P3-201ENST00000441562 1189 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 ARL2BPP10-201ENST00000446487 531 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 EEF1A1P1-201ENST00000447052 739 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 RPL31P53-201ENST00000457065 348 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 PPIAP21-201ENST00000464473 501 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 RPS27AP16-201ENST00000492222 470 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 IGKV2-38-201ENST00000517443 247 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 OR8G5-201ENST00000524943 1041 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 AC140479.6-201ENST00000633535 357 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 AC123912.3-201ENST00000600907 1367 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 AC010329.2-201ENST00000595195 2737 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 MARK2P15-201ENST00000432204 2186 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 OR56B2P-202ENST00000641377 2453 ntBASIC3.96□□□□□ -1.78
VAPAQ9P0L0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.96□□□□□ -1.78
VAPAQ9P0L0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 IQCB2P-201ENST00000401788 1633 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AC008725.1-201ENST00000605123 2263 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 RNU6-304P-201ENST00000364855 107 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AC092642.1-201ENST00000392417 425 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 RN7SKP278-201ENST00000410504 342 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 RN7SKP235-201ENST00000410662 305 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AC048351.1-201ENST00000420064 602 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 MFSD13B-201ENST00000420133 1290 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AC092647.1-201ENST00000420654 287 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 CYP4F29P-201ENST00000420685 446 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AL356387.2-201ENST00000422272 243 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms