Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 Y_RNA.192-201ENST00000363977 102 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 RNU6-171P-201ENST00000384354 107 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AL359643.1-201ENST00000404109 423 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 MIR1286-201ENST00000408112 78 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC006960.1-201ENST00000419980 153 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AL355433.1-201ENST00000422804 300 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 MTND5P25-201ENST00000430499 799 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 RPL7P34-201ENST00000433316 712 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 RPL19P16-201ENST00000433839 588 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 GAPDHP25-201ENST00000447061 1001 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 COPS8P2-201ENST00000473228 627 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC058823.1-201ENST00000485315 474 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 UBA52P3-201ENST00000491303 382 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC005351.1-201ENST00000511152 786 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC116353.3-201ENST00000511215 249 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 RNU6-202P-201ENST00000515998 96 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 SCARNA21.2-201ENST00000516600 166 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 RNU6-885P-201ENST00000516607 104 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC087808.1-201ENST00000520501 361 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC100784.1-201ENST00000522790 310 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC090022.1-201ENST00000546569 311 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 GTF2IP8-201ENST00000560687 584 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC009094.1-201ENST00000564443 426 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC018552.3-201ENST00000567416 561 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AGGF1P6-201ENST00000569213 976 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 MIR1269B-201ENST00000580405 75 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 DUXAP3-201ENST00000603616 594 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AL139344.1-201ENST00000605228 195 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC080013.3-201ENST00000606839 578 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC004908.3-201ENST00000610248 625 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AP003485.2-201ENST00000623636 610 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AL034549.2-201ENST00000618285 3373 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 RARSP1-201ENST00000542842 1418 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC100778.3-201ENST00000580060 1750 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 AC011447.7-201ENST00000624228 1590 ntBASIC5.04□□□□□ -1.6
NECTIN3Q9NQS3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 AC235565.1-201ENST00000456962 1325 ntBASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 RNU6-1066P-201ENST00000363573 105 ntBASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 RNU6-178P-201ENST00000384631 104 ntBASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 RNU6-1300P-201ENST00000391046 108 ntBASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 PRRC2CP1-201ENST00000404428 159 ntBASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 AP000534.2-201ENST00000412729 568 ntBASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 BX510359.3-201ENST00000422168 306 ntBASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 AC104333.2-201ENST00000422630 192 ntBASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 Z93242.1-201ENST00000427102 353 ntBASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 USP9YP31-201ENST00000431405 881 ntBASIC5.03□□□□□ -1.6
NECTIN3Q9NQS3 RPS6P15-201ENST00000431996 751 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms