Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 AC004492.1-201ENST00000607036 742 ntBASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 AC100793.4-201ENST00000613683 429 ntBASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 AC010678.1-201ENST00000614118 713 ntBASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 AC127024.6-201ENST00000621598 424 ntBASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 OR13C1P-202ENST00000641378 2919 ntBASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 AC090017.1-201ENST00000548612 1779 ntBASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TRIM39Q9HCM9 AL118496.1-201ENST00000440201 1812 ntBASIC5.71□□□□□ -1.49
TRIM39Q9HCM9 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.71□□□□□ -1.49
TRIM39Q9HCM9 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM39Q9HCM9 AL603750.1-201ENST00000624216 1717 ntBASIC5.71□□□□□ -1.49
TRIM39Q9HCM9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
TRIM39Q9HCM9 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.71□□□□□ -1.49
TRIM39Q9HCM9 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.71□□□□□ -1.49
TRIM39Q9HCM9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM39Q9HCM9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AL079343.1-201ENST00000572358 1771 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 MTCO1P23-201ENST00000415223 1526 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC016716.1-201ENST00000265882 708 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 RNU6-501P-201ENST00000364072 100 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 RN7SKP78-201ENST00000364711 318 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 PRRC2CP1-201ENST00000404428 159 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 RNU2-28P-201ENST00000410457 189 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AL357752.1-201ENST00000412817 349 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 PRELID3BP11-201ENST00000414230 479 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AL354868.1-201ENST00000417077 482 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC008280.1-201ENST00000418851 412 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 VTI1BP4-201ENST00000427516 527 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC104843.2-201ENST00000427666 297 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC073335.1-201ENST00000427776 363 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 HSPD1P12-201ENST00000429127 1069 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 RPL7P56-201ENST00000429441 717 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 HMGB3P24-201ENST00000433260 622 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC010881.1-201ENST00000433830 235 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AL831737.1-201ENST00000441288 271 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 TRIM60P18-201ENST00000441518 828 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 BMI1P1-201ENST00000445879 941 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 RPS23P9-201ENST00000448848 438 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 FRG2FP-204ENST00000453982 852 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC004129.2-201ENST00000457229 287 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 RNA5SP269-201ENST00000459032 137 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC006511.1-201ENST00000470614 315 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC022215.1-201ENST00000481770 362 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 RN7SL570P-201ENST00000484405 292 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 PPIAP19-201ENST00000486414 492 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 CDC42P4-201ENST00000510507 563 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 RNU6-347P-201ENST00000516658 105 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 CYCSP22-201ENST00000517555 339 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC096996.1-201ENST00000563813 325 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC008687.2-201ENST00000597865 520 ntBASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM39Q9HCM9 AC231657.1-201ENST00000624313 397 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms