Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AL139395.1-201ENST00000603662 160 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AL035461.2-201ENST00000619201 524 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AL158062.1-201ENST00000619632 745 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 AL023881.1-201ENST00000621088 301 ntBASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.03□□□□□ -1.76
LRTM1Q9HBL6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 AP000756.2-201ENST00000624168 2567 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 SNORA37-201ENST00000384504 129 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 U3.22-201ENST00000391120 215 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 JKAMPP1-201ENST00000413804 919 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 RPL6P29-201ENST00000414863 865 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 NANOGP6-201ENST00000429190 847 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 AC023141.6-201ENST00000429418 337 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 BMS1P19-201ENST00000433925 393 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 SEPT14P1-201ENST00000458703 648 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 AC010476.1-201ENST00000519111 851 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 AC138701.1-201ENST00000524329 714 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 MIR3160-1-201ENST00000577972 85 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 OR1AB1P-201ENST00000585564 761 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 OR52H1-202ENST00000641796 1061 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 KPNA2P2-201ENST00000419546 1489 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 AL158163.1-201ENST00000603915 1649 ntBASIC4.02□□□□□ -1.77
LRTM1Q9HBL6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 Z82217.1-201ENST00000625157 8149 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 RNA5SP306-201ENST00000411087 107 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 NRBF2P2-201ENST00000413087 861 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 HSPE1P22-201ENST00000456856 327 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 AC013356.1-201ENST00000489027 564 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 RNA5SP519-201ENST00000516480 119 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 SULT1C2P2-201ENST00000562517 294 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 AC090312.1-201ENST00000580637 348 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 FAM27D1-201ENST00000612308 341 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 MIR6716-201ENST00000613413 80 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 AC233309.1-201ENST00000619522 751 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 AC015908.5-201ENST00000623289 343 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 AP005264.7-201ENST00000625003 745 ntBASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
LRTM1Q9HBL6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4□□□□□ -1.77
LRTM1Q9HBL6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4□□□□□ -1.77
LRTM1Q9HBL6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4□□□□□ -1.77
LRTM1Q9HBL6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4□□□□□ -1.77
LRTM1Q9HBL6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LRTM1Q9HBL6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4□□□□□ -1.77
LRTM1Q9HBL6 OR10J6P-201ENST00000289731 930 ntBASIC4□□□□□ -1.77
LRTM1Q9HBL6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LRTM1Q9HBL6 RNA5SP447-201ENST00000363749 119 ntBASIC4□□□□□ -1.77
LRTM1Q9HBL6 AC009302.1-201ENST00000417147 390 ntBASIC4□□□□□ -1.77
LRTM1Q9HBL6 AL158073.1-201ENST00000426848 1104 ntBASIC4□□□□□ -1.77
LRTM1Q9HBL6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4□□□□□ -1.77
LRTM1Q9HBL6 RPL23AP46-201ENST00000438548 490 ntBASIC4□□□□□ -1.77
LRTM1Q9HBL6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4□□□□□ -1.77
LRTM1Q9HBL6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms