Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AC079741.1-201ENST00000321498 212 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 RNVU1-6-201ENST00000364688 164 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 HSPD1P16-201ENST00000402302 394 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 MIR1911-201ENST00000410783 80 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 SNRPFP1-201ENST00000414761 252 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 RPS12P5-201ENST00000423449 371 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AC245517.2-201ENST00000442890 346 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 ARL2BPP10-201ENST00000446487 531 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 EEF1A1P1-201ENST00000447052 739 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 OR52A4P-203ENST00000498233 1014 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 RNU6-1004P-201ENST00000516584 111 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 IGKV2D-10-201ENST00000520194 281 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 PHBP17-201ENST00000528576 541 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 DEFB109D-201ENST00000529497 240 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 MIMT1-201ENST00000597105 1050 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AC005034.4-201ENST00000603612 899 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AC079587.1-201ENST00000603846 277 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AL355816.1-201ENST00000607951 118 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 Mico1.1-201ENST00000611698 204 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AC100827.5-201ENST00000615883 426 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AL158196.1-201ENST00000616786 434 ntBASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.45□□□□□ -1.7
LRRC40Q9H9A6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 RNU1-130P-201ENST00000363930 160 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 GAPDHP49-201ENST00000421421 961 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 AL132765.1-201ENST00000434165 553 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 AC231760.1-201ENST00000498002 260 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 ATP1B1P1-201ENST00000509767 915 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 AL352979.3-201ENST00000553515 247 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 AC023158.1-201ENST00000561632 1025 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 AC067852.7-201ENST00000623270 535 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 AC019278.1-201ENST00000623516 479 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 AC067931.1-201ENST00000624190 671 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 RAD17P1-201ENST00000418130 2042 ntBASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
LRRC40Q9H9A6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 RPS3AP23-201ENST00000401762 784 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 RPS16P5-201ENST00000406501 404 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 RPS23P10-201ENST00000416185 486 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 AL590139.1-201ENST00000416267 400 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 RBMY2KP-201ENST00000418221 992 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 PRELID3BP10-201ENST00000431957 584 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 AL031663.1-201ENST00000437445 219 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 CBX1P4-201ENST00000439415 457 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 ABCF2P2-201ENST00000450549 296 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 HMGB1P26-201ENST00000452520 628 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 DHFRP3-201ENST00000455595 559 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 RPL21P126-201ENST00000470049 478 ntBASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
LRRC40Q9H9A6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms