Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 RNU6-1251P-201ENST00000364502 107 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 RNU6-354P-201ENST00000383862 107 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 RNU6-610P-201ENST00000384264 107 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 MIR513B-201ENST00000385136 84 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 HMGB3P19-201ENST00000403971 560 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AL355615.1-201ENST00000406187 641 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 MIR1302-8-201ENST00000408342 128 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AL356968.2-201ENST00000412769 1257 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 OR6C64P-201ENST00000419708 825 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC009480.2-201ENST00000422916 432 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 PTP4A1P7-201ENST00000423476 514 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC092447.2-201ENST00000435487 669 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC005154.2-201ENST00000438110 379 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AL157884.3-201ENST00000448273 1184 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC010326.1-201ENST00000462726 602 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 RPL12P20-201ENST00000475538 479 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC091163.3-201ENST00000518269 1144 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC087373.1-201ENST00000524920 491 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 NDUFB4P11-201ENST00000560510 395 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AGGF1P6-201ENST00000569213 976 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 OR7A19P-201ENST00000608051 733 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 AC015922.4-201ENST00000612568 690 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 MIR6853-201ENST00000619642 74 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 MIR6758-201ENST00000620653 63 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 BX649567.1-201ENST00000642071 1134 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.06□□□□□ -1.6
EBF3Q9H4W6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
EBF3Q9H4W6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC007382.1-201ENST00000624376 2618 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 TAF9BP2-201ENST00000400856 499 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 RN7SKP182-201ENST00000410772 298 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 TBCAP2-201ENST00000416175 326 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 BX510359.2-201ENST00000417920 305 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC241520.1-201ENST00000422654 1099 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AL359265.2-201ENST00000434367 631 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC006994.1-201ENST00000438212 839 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AL450023.3-201ENST00000440592 271 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 OR10R1P-201ENST00000441524 1141 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 MTCO1P53-201ENST00000441633 699 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC044797.1-201ENST00000445744 679 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AC004022.1-201ENST00000447766 1066 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 RPL7P55-201ENST00000450522 746 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 ZNF886P-201ENST00000450781 723 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 NAP1L1P3-201ENST00000462291 880 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
EBF3Q9H4W6 RN7SL441P-201ENST00000492388 296 ntBASIC5.05□□□□□ -1.6
EBF3Q9H4W6 OR2A20P-203ENST00000498397 1268 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 243.8 ms