Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL035461.2-201ENST00000619201 524 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AC140479.6-201ENST00000633535 357 ntBASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCSER1Q9C0I3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AL583835.1-201ENST00000399570 407 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 RPL26P37-201ENST00000411983 438 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 CYCSP10-201ENST00000417973 294 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AL592293.2-201ENST00000422292 996 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 EIF4EP1-201ENST00000422311 642 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AC099336.2-201ENST00000422457 254 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 NIPA2P1-201ENST00000426223 976 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 PHBP16-201ENST00000446318 950 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AL157827.1-201ENST00000447622 132 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AL627224.1-201ENST00000448334 444 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 RPL23AP81-201ENST00000455252 467 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AC099560.2-201ENST00000457554 255 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AC013356.1-201ENST00000489027 564 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 UBA52P3-201ENST00000491303 382 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AC006499.6-201ENST00000511169 607 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 TRAV8-5-201ENST00000537369 341 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AC090312.1-201ENST00000580637 348 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 LINC00901.1-201ENST00000617252 152 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AC009704.2-201ENST00000618739 483 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AL669942.2-201ENST00000620352 697 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 MIR6810-201ENST00000622701 70 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AC119674.1-212ENST00000641155 993 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 AL451142.2-201ENST00000429076 2090 ntBASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CCSER1Q9C0I3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 U3.22-201ENST00000391120 215 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AMZ2P2-201ENST00000406819 1057 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AL161631.1-201ENST00000417933 486 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AL356806.1-201ENST00000422524 916 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AC011998.1-201ENST00000433403 117 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 HLA-N-201ENST00000437516 135 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AC092013.1-201ENST00000438795 332 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AL357520.1-201ENST00000441557 453 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 EIF2S2P5-201ENST00000457635 968 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 RN7SL691P-201ENST00000494487 301 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 BNIP3P41-201ENST00000503774 571 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 NPM1P6-201ENST00000521088 871 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 DYNLL1P4-201ENST00000549314 266 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 RN7SL176P-201ENST00000580352 264 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AC123786.2-201ENST00000603459 275 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AL031666.3-201ENST00000609320 1006 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AC239803.2-201ENST00000610161 430 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 AC008013.2-202ENST00000637965 364 ntBASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCSER1Q9C0I3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms