Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AMD1P1-201ENST00000457220 922 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 RN7SL197P-201ENST00000466981 299 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 RPL38P3-201ENST00000484463 213 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC073610.1-201ENST00000489971 396 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 SETP14-201ENST00000497538 873 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC105252.1-201ENST00000503089 286 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 MIR548AB-201ENST00000584917 84 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AP000860.1-201ENST00000605250 559 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 RNU4-89P-201ENST00000607443 133 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC007742.2-201ENST00000618226 398 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC006338.1-201ENST00000618453 749 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC129915.3-201ENST00000634128 948 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
FOXP3Q9BZS1 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 RPL21P132-201ENST00000331267 462 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 RNU4-12P-201ENST00000365233 139 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 RN7SKP69-201ENST00000365390 305 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 MIR217-201ENST00000384817 110 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AL031985.1-201ENST00000392713 418 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AL161909.1-201ENST00000397390 712 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 MIR1277-201ENST00000408536 78 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 MTATP6P27-201ENST00000416987 621 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 DPY19L1P2-201ENST00000426647 915 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 USP12PX-201ENST00000432383 1057 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 UBE2FP3-201ENST00000436366 524 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AL663074.2-201ENST00000440621 479 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 MTND3P10-201ENST00000450967 341 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AC090013.1-201ENST00000485147 480 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AC022483.1-201ENST00000514020 567 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 MIR2117-201ENST00000516780 80 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AC060775.1-201ENST00000518241 520 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AP002812.4-201ENST00000532139 286 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AP002453.2-201ENST00000533503 320 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 FGF7P1-201ENST00000582820 288 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 SEPT7P9-203ENST00000604116 343 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AP000894.4-201ENST00000610185 483 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AC012150.2-201ENST00000621300 544 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 MIR4302-201ENST00000638058 60 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AC119674.1-212ENST00000641155 993 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AC092111.2-201ENST00000611627 1414 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 AC007342.5-201ENST00000571340 2142 ntBASIC6.05□□□□□ -1.44
FOXP3Q9BZS1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms