Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 AP001273.1-201ENST00000624493 3152 ntBASIC6.17□□□□□ -1.42
SCAPERQ9BY12 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC6.17□□□□□ -1.42
SCAPERQ9BY12 SNORA60-201ENST00000362396 134 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AL078604.1-201ENST00000404609 466 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AC011471.1-201ENST00000585766 187 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 SNORD91B-202ENST00000608459 222 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 SUPT16HP1-201ENST00000537175 3133 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AC007068.1-201ENST00000396690 844 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AL358472.1-201ENST00000431295 329 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AC104306.1-201ENST00000449702 371 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 RN7SKP46-201ENST00000515942 234 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AC023389.2-201ENST00000580031 955 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 ZNF415P1-201ENST00000582279 1166 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AC015726.1-201ENST00000602353 681 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 AL353726.1-201ENST00000614041 1000 ntBASIC6.16□□□□□ -1.42
SCAPERQ9BY12 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCAPERQ9BY12 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCAPERQ9BY12 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCAPERQ9BY12 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCAPERQ9BY12 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SCAPERQ9BY12 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SCAPERQ9BY12 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SCAPERQ9BY12 AC007066.1-201ENST00000392902 381 ntBASIC6.15□□□□□ -1.43
SCAPERQ9BY12 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
SCAPERQ9BY12 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.15□□□□□ -1.43
SCAPERQ9BY12 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC6.15□□□□□ -1.43
SCAPERQ9BY12 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.15□□□□□ -1.43
SCAPERQ9BY12 AC104978.1-201ENST00000449387 391 ntBASIC6.15□□□□□ -1.43
SCAPERQ9BY12 SNORA59A-201ENST00000459326 152 ntBASIC6.15□□□□□ -1.43
SCAPERQ9BY12 RPL23AP65-201ENST00000475608 468 ntBASIC6.15□□□□□ -1.43
SCAPERQ9BY12 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.15□□□□□ -1.43
SCAPERQ9BY12 AC090151.1-201ENST00000520784 730 ntBASIC6.15□□□□□ -1.43
SCAPERQ9BY12 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.15□□□□□ -1.43
SCAPERQ9BY12 AC021242.1-201ENST00000507315 2035 ntBASIC6.15□□□□□ -1.43
SCAPERQ9BY12 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SCAPERQ9BY12 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SCAPERQ9BY12 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 UBE2Q2P12-201ENST00000414573 204 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 ABCF2P2-201ENST00000450549 296 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 AC026427.2-201ENST00000506228 536 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 SCARNA14-201ENST00000516903 136 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 NDUFA5P2-201ENST00000519723 344 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 MIR4298-201ENST00000584380 73 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 OR2BH1P-201ENST00000608850 864 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 AC016957.2-201ENST00000616998 848 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 AC243756.2-201ENST00000618406 463 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 AC140113.4-201ENST00000622087 222 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 ERCC6-202ENST00000374127 1782 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.14□□□□□ -1.43
SCAPERQ9BY12 HSPD1P14-201ENST00000432666 1618 ntBASIC6.14□□□□□ -1.43
SCAPERQ9BY12 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.13□□□□□ -1.43
SCAPERQ9BY12 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 AC093849.1-201ENST00000563631 2209 ntBASIC6.13□□□□□ -1.43
SCAPERQ9BY12 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCAPERQ9BY12 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms