Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK1Q99986 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK1Q99986 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK1Q99986 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.11□□□□□ -1.59
VRK1Q99986 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRK1Q99986 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VRK1Q99986 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VRK1Q99986 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.11□□□□□ -1.59
VRK1Q99986 AC090017.1-201ENST00000548612 1779 ntBASIC5.11□□□□□ -1.59
VRK1Q99986 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VRK1Q99986 AC027088.4-201ENST00000611559 1947 ntBASIC5.11□□□□□ -1.59
VRK1Q99986 AC027228.2-201ENST00000567141 2154 ntBASIC5.11□□□□□ -1.59
VRK1Q99986 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.1□□□□□ -1.59
VRK1Q99986 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK1Q99986 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK1Q99986 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK1Q99986 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK1Q99986 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.1□□□□□ -1.59
VRK1Q99986 RNU1-74P-201ENST00000384108 171 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 SNORA17A-201ENST00000391185 133 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK1Q99986 VDAC2P1-201ENST00000399358 958 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 AC002524.1-201ENST00000411687 547 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 TPMTP3-201ENST00000411928 735 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 AC245060.4-201ENST00000413293 1121 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK1Q99986 AC008280.1-201ENST00000418851 412 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK1Q99986 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK1Q99986 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.1□□□□□ -1.59
VRK1Q99986 AL049610.1-201ENST00000423374 372 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VRK1Q99986 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK1Q99986 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK1Q99986 AC138761.5-201ENST00000433967 325 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.1□□□□□ -1.59
VRK1Q99986 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 AL138878.2-201ENST00000440581 1241 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 AL512593.1-201ENST00000444758 779 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK1Q99986 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 NXT1P1-201ENST00000458481 316 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 RN7SL269P-201ENST00000467795 305 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.1□□□□□ -1.59
VRK1Q99986 AC124945.1-201ENST00000485133 188 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 RPL23AP40-201ENST00000487630 390 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 PDCL3P4-201ENST00000489621 720 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 RN7SL57P-201ENST00000493687 290 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK1Q99986 AC108078.3-201ENST00000502633 489 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 SNX5P1-201ENST00000505757 1041 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK1Q99986 TOMM22P4-201ENST00000511318 336 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 RNY4P37-201ENST00000516225 96 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK1Q99986 SOD1P3-201ENST00000518682 454 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VRK1Q99986 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK1Q99986 TPM3P3-201ENST00000521343 354 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 MTCYBP20-201ENST00000524239 1129 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.1□□□□□ -1.59
VRK1Q99986 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK1Q99986 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VRK1Q99986 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.1□□□□□ -1.59
VRK1Q99986 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.1□□□□□ -1.59
VRK1Q99986 AC123786.2-201ENST00000603459 275 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 MTCYBP22-201ENST00000603788 447 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 AC092354.1-201ENST00000606057 376 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 uc_338.26-201ENST00000612659 160 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK1Q99986 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.1□□□□□ -1.59
VRK1Q99986 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.1□□□□□ -1.59
VRK1Q99986 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.1□□□□□ -1.59
VRK1Q99986 SNORA17.5-201ENST00000630429 132 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 AC090582.1-201ENST00000636321 199 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VRK1Q99986 SAMMSON-213ENST00000641336 1521 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 MAPK10-328ENST00000641553 4009 ntBASIC5.1□□□□□ -1.59
VRK1Q99986 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.1□□□□□ -1.59
VRK1Q99986 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK1Q99986 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VRK1Q99986 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
VRK1Q99986 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK1Q99986 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.09□□□□□ -1.59
VRK1Q99986 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK1Q99986 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK1Q99986 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK1Q99986 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VRK1Q99986 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VRK1Q99986 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms