Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 OR5AN2P-201ENST00000534535 896 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 AP006289.1-201ENST00000538089 277 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 MRPS36P5-201ENST00000551909 298 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 OR4U1P-201ENST00000554958 912 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 DUXAP3-201ENST00000603616 594 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC005021.1-201ENST00000608730 355 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC100847.1-201ENST00000611316 481 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 MIR6780A-201ENST00000615089 68 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 MIR7703-201ENST00000620784 77 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 AC105105.5-201ENST00000622635 1294 ntBASIC4.77□□□□□ -1.65
RTP4Q96DX8 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RTP4Q96DX8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.77□□□□□ -1.65
RTP4Q96DX8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RTP4Q96DX8 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTP4Q96DX8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTP4Q96DX8 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTP4Q96DX8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 AL672167.1-203ENST00000641299 2975 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 AC079741.1-201ENST00000321498 212 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 RNU1-20P-201ENST00000363314 162 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 RNA5SP151-201ENST00000365632 117 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 RNY3P9-201ENST00000384727 106 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 EI24P3-201ENST00000399046 1062 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 RPS16P5-201ENST00000406501 404 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 RN7SKP100-201ENST00000411258 284 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 KRR1P1-201ENST00000419430 803 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 HSPE1P16-201ENST00000426640 348 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 AC093422.3-201ENST00000428506 305 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 RPL21P91-201ENST00000429231 479 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 NRBF2P3-201ENST00000432731 865 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 ARF4P4-201ENST00000439608 520 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 RN7SL459P-201ENST00000481078 302 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 SUMO1P1-201ENST00000497904 306 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTP4Q96DX8 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTP4Q96DX8 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 RNU6-311P-201ENST00000516224 102 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 IGKV1-32-201ENST00000519290 311 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 OR10V3P-201ENST00000525712 725 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 AL110118.1-201ENST00000553543 400 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 AC124283.4-201ENST00000581815 456 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 AC008745.1-201ENST00000604064 271 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 AC093673.2-201ENST00000609674 331 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 MIR378J-201ENST00000611988 109 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 VN1R9P-201ENST00000614184 867 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 U6.48-201ENST00000618523 106 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 AP003485.2-201ENST00000623636 610 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 MIR7641-1-201ENST00000627518 61 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RTP4Q96DX8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 AP001273.1-201ENST00000624493 3152 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 AL442128.2-201ENST00000620246 1824 ntBASIC4.76□□□□□ -1.65
RTP4Q96DX8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.76□□□□□ -1.65
RTP4Q96DX8 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RTP4Q96DX8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RTP4Q96DX8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTP4Q96DX8 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTP4Q96DX8 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.75□□□□□ -1.65
RTP4Q96DX8 AL355578.1-201ENST00000607405 1328 ntBASIC4.75□□□□□ -1.65
RTP4Q96DX8 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTP4Q96DX8 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTP4Q96DX8 RAD1P1-201ENST00000231383 813 ntBASIC4.75□□□□□ -1.65
RTP4Q96DX8 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RTP4Q96DX8 RNA5SP191-201ENST00000362585 102 ntBASIC4.75□□□□□ -1.65
RTP4Q96DX8 RNA5SP505-201ENST00000364748 108 ntBASIC4.75□□□□□ -1.65
RTP4Q96DX8 RNU6-906P-201ENST00000384700 70 ntBASIC4.75□□□□□ -1.65
RTP4Q96DX8 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTP4Q96DX8 AL603865.2-201ENST00000401679 213 ntBASIC4.75□□□□□ -1.65
RTP4Q96DX8 GSTA12P-201ENST00000402398 508 ntBASIC4.75□□□□□ -1.65
RTP4Q96DX8 MTCO2P31-201ENST00000402702 684 ntBASIC4.75□□□□□ -1.65
RTP4Q96DX8 ATF1P1-201ENST00000406040 927 ntBASIC4.75□□□□□ -1.65
RTP4Q96DX8 AL449283.1-202ENST00000418249 604 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms