Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
AP3S1Q92572 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.67□□□□□ -1.82
AP3S1Q92572 RPS4XP5-202ENST00000449995 1334 ntBASIC3.67□□□□□ -1.82
AP3S1Q92572 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S1Q92572 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP3S1Q92572 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
AP3S1Q92572 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP3S1Q92572 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
AP3S1Q92572 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC3.66□□□□□ -1.82
AP3S1Q92572 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
AP3S1Q92572 AMZ2P2-201ENST00000406819 1057 ntBASIC3.66□□□□□ -1.82
AP3S1Q92572 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.66□□□□□ -1.82
AP3S1Q92572 AC048351.1-201ENST00000420064 602 ntBASIC3.66□□□□□ -1.82
AP3S1Q92572 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.66□□□□□ -1.82
AP3S1Q92572 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.66□□□□□ -1.82
AP3S1Q92572 CACYBPP1-201ENST00000438592 684 ntBASIC3.66□□□□□ -1.82
AP3S1Q92572 AC009263.1-201ENST00000441193 1239 ntBASIC3.66□□□□□ -1.82
AP3S1Q92572 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.66□□□□□ -1.82
AP3S1Q92572 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.66□□□□□ -1.82
AP3S1Q92572 AURKAPS1-201ENST00000451805 1212 ntBASIC3.66□□□□□ -1.82
AP3S1Q92572 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.66□□□□□ -1.82
AP3S1Q92572 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.66□□□□□ -1.82
AP3S1Q92572 RN7SL271P-201ENST00000487601 295 ntBASIC3.66□□□□□ -1.82
AP3S1Q92572 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.66□□□□□ -1.82
AP3S1Q92572 NIPA2P2-201ENST00000496376 1083 ntBASIC3.66□□□□□ -1.82
AP3S1Q92572 AC010374.1-201ENST00000503762 1237 ntBASIC3.66□□□□□ -1.82
AP3S1Q92572 USP9YP5-201ENST00000511770 630 ntBASIC3.66□□□□□ -1.82
AP3S1Q92572 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC3.66□□□□□ -1.82
AP3S1Q92572 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.66□□□□□ -1.82
AP3S1Q92572 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.66□□□□□ -1.82
AP3S1Q92572 SNORD95-201ENST00000579879 68 ntBASIC3.66□□□□□ -1.82
AP3S1Q92572 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.66□□□□□ -1.82
AP3S1Q92572 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.66□□□□□ -1.82
AP3S1Q92572 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC3.66□□□□□ -1.82
AP3S1Q92572 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.66□□□□□ -1.82
AP3S1Q92572 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AP3S1Q92572 MIR6889-201ENST00000613185 59 ntBASIC3.66□□□□□ -1.82
AP3S1Q92572 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
AP3S1Q92572 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.66□□□□□ -1.82
AP3S1Q92572 AC140479.6-201ENST00000633535 357 ntBASIC3.66□□□□□ -1.82
AP3S1Q92572 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.66□□□□□ -1.82
AP3S1Q92572 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP3S1Q92572 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AP3S1Q92572 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP3S1Q92572 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AP3S1Q92572 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
AP3S1Q92572 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.66□□□□□ -1.82
AP3S1Q92572 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
AP3S1Q92572 HSPA8P1-201ENST00000425843 1833 ntBASIC3.65□□□□□ -1.82
AP3S1Q92572 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.65□□□□□ -1.82
AP3S1Q92572 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.65□□□□□ -1.82
AP3S1Q92572 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
AP3S1Q92572 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
AP3S1Q92572 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.65□□□□□ -1.83
AP3S1Q92572 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.65□□□□□ -1.83
AP3S1Q92572 RNA5SP113-201ENST00000410486 84 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.65□□□□□ -1.83
AP3S1Q92572 AC092832.1-201ENST00000422934 400 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 AL732292.1-201ENST00000426692 226 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 AC005154.2-201ENST00000438110 379 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.65□□□□□ -1.83
AP3S1Q92572 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.65□□□□□ -1.83
AP3S1Q92572 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.65□□□□□ -1.83
AP3S1Q92572 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 AC110749.1-201ENST00000462007 357 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.65□□□□□ -1.83
AP3S1Q92572 RN7SL30P-201ENST00000488416 306 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 AC005912.1-201ENST00000495392 255 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
AP3S1Q92572 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.65□□□□□ -1.83
AP3S1Q92572 NDUFB4P9-201ENST00000511646 388 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 AC026726.1-201ENST00000512859 601 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 BTF3P13-201ENST00000513224 490 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 IGKV2-18-201ENST00000522607 343 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC3.65□□□□□ -1.83
AP3S1Q92572 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC3.65□□□□□ -1.83
AP3S1Q92572 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.65□□□□□ -1.83
AP3S1Q92572 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.65□□□□□ -1.83
AP3S1Q92572 AL109741.3-201ENST00000561748 592 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 AL133457.1-201ENST00000564251 987 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 BGLT3-201ENST00000564523 994 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.65□□□□□ -1.83
AP3S1Q92572 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
AP3S1Q92572 AC073091.2-201ENST00000603205 907 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 MIR6853-201ENST00000619642 74 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 OR8A1-204ENST00000642111 1145 ntBASIC3.65□□□□□ -1.83
AP3S1Q92572 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
AP3S1Q92572 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
AP3S1Q92572 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
AP3S1Q92572 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
AP3S1Q92572 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
AP3S1Q92572 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
AP3S1Q92572 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
AP3S1Q92572 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
AP3S1Q92572 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.64□□□□□ -1.83
AP3S1Q92572 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
AP3S1Q92572 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
AP3S1Q92572 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
AP3S1Q92572 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms