Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOPBP1Q92547 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TOPBP1Q92547 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
TOPBP1Q92547 MIR199A2-201ENST00000385289 110 ntBASIC6.61□□□□□ -1.35
TOPBP1Q92547 AL122016.1-201ENST00000403365 367 ntBASIC6.61□□□□□ -1.35
TOPBP1Q92547 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC6.61□□□□□ -1.35
TOPBP1Q92547 GTF2IP8-201ENST00000560687 584 ntBASIC6.61□□□□□ -1.35
TOPBP1Q92547 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.61□□□□□ -1.35
TOPBP1Q92547 AC026368.1-201ENST00000614934 690 ntBASIC6.61□□□□□ -1.35
TOPBP1Q92547 AC005086.4-201ENST00000623065 213 ntBASIC6.61□□□□□ -1.35
TOPBP1Q92547 AC243312.2-201ENST00000623340 601 ntBASIC6.61□□□□□ -1.35
TOPBP1Q92547 AL392088.2-201ENST00000637607 285 ntBASIC6.61□□□□□ -1.35
TOPBP1Q92547 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.61□□□□□ -1.35
TOPBP1Q92547 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.61□□□□□ -1.35
TOPBP1Q92547 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TOPBP1Q92547 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TOPBP1Q92547 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.61□□□□□ -1.35
TOPBP1Q92547 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TOPBP1Q92547 MIR133A2-201ENST00000347538 102 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 CBX1P3-201ENST00000413296 527 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 RPL36AP10-201ENST00000421785 322 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 RPS3AP46-201ENST00000448352 682 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 RN7SKP57-201ENST00000517248 293 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 CYCSP28-201ENST00000534284 321 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 AC124068.1-201ENST00000563131 678 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 AL451044.1-201ENST00000604867 238 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 NAMPTP1-201ENST00000440465 2514 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TOPBP1Q92547 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TOPBP1Q92547 SNORD35B-201ENST00000363660 87 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 CYCSP4-201ENST00000429682 331 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TOPBP1Q92547 AL445433.1-201ENST00000457507 257 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 DEFB109D-201ENST00000529497 240 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 AC107993.1-201ENST00000591343 684 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 AC090246.1-201ENST00000616499 426 ntBASIC6.6□□□□□ -1.35
TOPBP1Q92547 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.6□□□□□ -1.35
TOPBP1Q92547 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TOPBP1Q92547 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
TOPBP1Q92547 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.59□□□□□ -1.35
TOPBP1Q92547 AC126323.6-202ENST00000568092 3511 ntBASIC6.59□□□□□ -1.35
TOPBP1Q92547 SOD2P1-201ENST00000396543 562 ntBASIC6.59□□□□□ -1.35
TOPBP1Q92547 VDAC1P9-201ENST00000412766 841 ntBASIC6.59□□□□□ -1.35
TOPBP1Q92547 OR4K6P-201ENST00000416478 897 ntBASIC6.59□□□□□ -1.35
TOPBP1Q92547 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.59□□□□□ -1.35
TOPBP1Q92547 AC108022.1-201ENST00000493466 478 ntBASIC6.59□□□□□ -1.35
TOPBP1Q92547 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.59□□□□□ -1.35
TOPBP1Q92547 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.59□□□□□ -1.35
TOPBP1Q92547 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TOPBP1Q92547 AC020914.6-201ENST00000594327 272 ntBASIC6.59□□□□□ -1.35
TOPBP1Q92547 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TOPBP1Q92547 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC6.59□□□□□ -1.36
TOPBP1Q92547 AP002001.2-201ENST00000529025 1469 ntBASIC6.58□□□□□ -1.36
TOPBP1Q92547 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
TOPBP1Q92547 PGBD4P8-201ENST00000412993 562 ntBASIC6.58□□□□□ -1.36
TOPBP1Q92547 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.58□□□□□ -1.36
TOPBP1Q92547 AC073387.1-201ENST00000453261 709 ntBASIC6.58□□□□□ -1.36
TOPBP1Q92547 UBDP1-202ENST00000457888 382 ntBASIC6.58□□□□□ -1.36
TOPBP1Q92547 HMGN1P11-201ENST00000508668 303 ntBASIC6.58□□□□□ -1.36
TOPBP1Q92547 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TOPBP1Q92547 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.58□□□□□ -1.36
TOPBP1Q92547 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TOPBP1Q92547 AP001284.1-201ENST00000528393 2118 ntBASIC6.58□□□□□ -1.36
TOPBP1Q92547 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
TOPBP1Q92547 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOPBP1Q92547 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOPBP1Q92547 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TOPBP1Q92547 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOPBP1Q92547 PEX12P1-201ENST00000400284 1048 ntBASIC6.57□□□□□ -1.36
TOPBP1Q92547 ZNF602P-201ENST00000405929 924 ntBASIC6.57□□□□□ -1.36
TOPBP1Q92547 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.57□□□□□ -1.36
TOPBP1Q92547 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.57□□□□□ -1.36
TOPBP1Q92547 AC012417.1-201ENST00000582307 1039 ntBASIC6.57□□□□□ -1.36
TOPBP1Q92547 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TOPBP1Q92547 AC005005.4-201ENST00000623789 16698 ntBASIC6.57□□□□□ -1.36
TOPBP1Q92547 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TOPBP1Q92547 RNU1-33P-201ENST00000364249 162 ntBASIC6.56□□□□□ -1.36
TOPBP1Q92547 OR6K3-202ENST00000368146 996 ntBASIC6.56□□□□□ -1.36
TOPBP1Q92547 SNORD96B-201ENST00000386148 79 ntBASIC6.56□□□□□ -1.36
TOPBP1Q92547 PRELID3BP10-201ENST00000431957 584 ntBASIC6.56□□□□□ -1.36
TOPBP1Q92547 RPL23AP65-201ENST00000475608 468 ntBASIC6.56□□□□□ -1.36
TOPBP1Q92547 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC6.56□□□□□ -1.36
TOPBP1Q92547 AC098799.1-201ENST00000504752 800 ntBASIC6.56□□□□□ -1.36
TOPBP1Q92547 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms