Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AC006064.5-201ENST00000541782 248 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AL109766.1-201ENST00000555080 552 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AC068831.4-201ENST00000556118 109 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AC068714.1-201ENST00000559623 800 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 VN1R79P-201ENST00000593540 513 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AC020915.5-201ENST00000596836 964 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AC015849.6-201ENST00000605454 474 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AC090948.1-201ENST00000607464 549 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 AL031666.3-201ENST00000609320 1006 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 CFTRP2-201ENST00000634304 199 ntBASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.53□□□□□ -1.84
ZNF439Q8NDP4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
ZNF439Q8NDP4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.85
ZNF439Q8NDP4 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
ZNF439Q8NDP4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.53□□□□□ -1.85
ZNF439Q8NDP4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AC022893.2-201ENST00000564832 3296 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 IQCB2P-201ENST00000401788 1633 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AL583835.1-201ENST00000399570 407 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 RNA5SP39-201ENST00000411245 120 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 EIF1P3-201ENST00000423841 334 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 HLA-N-201ENST00000437516 135 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 RPL23AP52-201ENST00000439311 478 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 RN7SL98P-201ENST00000462271 300 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 RPS27AP16-201ENST00000492222 470 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AC106872.2-201ENST00000494303 480 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AC020593.1-201ENST00000507399 299 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 IGLVIV-65-201ENST00000517313 360 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 MIR4715-201ENST00000584117 79 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AC234771.5-201ENST00000600161 514 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 VN1R81P-201ENST00000602085 372 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 GMCL1P2-201ENST00000605230 823 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AC025175.1-201ENST00000606482 759 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AC140479.6-201ENST00000633535 357 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 AC053481.2-202ENST00000582394 1500 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 EIF2AP4-201ENST00000424793 1781 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 OR10AB1P-202ENST00000641219 1686 ntBASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ZNF439Q8NDP4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 ELOCP19-201ENST00000411919 318 ntBASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 RPS27AP7-201ENST00000422792 455 ntBASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 AL157831.1-201ENST00000426134 473 ntBASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 YWHAEP5-201ENST00000431545 765 ntBASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 AC011998.1-201ENST00000433403 117 ntBASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 CEACAMP1-201ENST00000434624 1035 ntBASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 PHBP16-201ENST00000446318 950 ntBASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 FABP3P2-201ENST00000453169 399 ntBASIC3.51□□□□□ -1.85
ZNF439Q8NDP4 MTND2P28-201ENST00000457540 1044 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms