Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SLC44A3Q8N4M1 AC007342.7-201ENST00000624610 2337 ntBASIC5.34□□□□□ -1.56
SLC44A3Q8N4M1 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
SLC44A3Q8N4M1 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 SGO1P2-201ENST00000429458 1589 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 ADAM24P-201ENST00000398655 2101 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC111188.2-201ENST00000529697 1387 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 SNORD56.6-201ENST00000384569 71 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 Y_RNA.559-201ENST00000384686 107 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 VTI1BP4-201ENST00000427516 527 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 ETF1P3-201ENST00000430422 1160 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC129850.1-201ENST00000436203 508 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 RPL5P25-201ENST00000441148 775 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC012512.1-201ENST00000446594 718 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC068587.1-201ENST00000483613 781 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 GLUD1P3-202ENST00000508551 200 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 SNORA31.13-201ENST00000516624 135 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 NRON-201ENST00000517270 370 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC019322.1-201ENST00000571869 389 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 MTATP6P3-201ENST00000581686 676 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC078795.2-201ENST00000602835 1252 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AL163642.2-201ENST00000604722 1019 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 OR2BH1P-201ENST00000608850 864 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC009704.2-201ENST00000618739 483 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 AC125336.1-201ENST00000508893 2827 ntBASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SLC44A3Q8N4M1 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 GLULP6-201ENST00000399502 913 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 Z97832.1-201ENST00000402490 328 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC004022.2-201ENST00000413824 193 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 UBE2V1P10-201ENST00000414685 269 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 MTCO3P41-201ENST00000414801 328 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC004074.1-201ENST00000421810 1063 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC006366.1-201ENST00000422002 759 ntBASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC44A3Q8N4M1 AC246680.2-201ENST00000422106 389 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms