Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RN7SKP44-201ENST00000363602 316 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 MIR1179-201ENST00000408703 91 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 RNA5SP36-201ENST00000410197 133 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 GSTM3P2-201ENST00000412746 530 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 MFSD13B-201ENST00000420133 1290 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 AC009480.2-201ENST00000422916 432 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 RPL12P34-201ENST00000424532 479 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 DNAJC19P7-201ENST00000428811 344 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 HLA-N-201ENST00000437516 135 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 FHP1-201ENST00000442741 703 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 AL035551.1-201ENST00000446931 348 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 AC104306.1-201ENST00000449702 371 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 RPS20P4-201ENST00000461659 355 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 S100A11P1-201ENST00000477525 312 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 AC006499.6-201ENST00000511169 607 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 TRAV8-5-201ENST00000537369 341 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 AP003497.2-201ENST00000624220 967 ntBASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC65Q8IXS2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 RNU1-14P-201ENST00000362759 152 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 RNA5SP513-201ENST00000364648 118 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 RN7SKP235-201ENST00000410662 305 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 RNA5SP104-201ENST00000410989 118 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 RPL6P29-201ENST00000414863 865 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AL732292.1-201ENST00000426692 226 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 RPS3AP54-201ENST00000435535 734 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC011276.1-201ENST00000469688 323 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 RN7SL459P-201ENST00000481078 302 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 RPL35P6-201ENST00000490024 372 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC025445.1-201ENST00000502728 300 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 BNIP3P41-201ENST00000503774 571 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC027176.2-201ENST00000559166 746 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC018552.3-201ENST00000567416 561 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC068790.4-201ENST00000602474 263 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC025946.2-201ENST00000603398 234 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AL031666.3-201ENST00000609320 1006 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AL445363.3-201ENST00000623080 671 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC008013.2-202ENST00000637965 364 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 AC009951.1-201ENST00000623674 2614 ntBASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC65Q8IXS2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.71□□□□□ -1.65
CCDC65Q8IXS2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 OR4K17-201ENST00000315543 1032 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 MIR3074-201ENST00000384885 81 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 NRBF2P2-201ENST00000413087 861 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 AC011933.1-201ENST00000413334 321 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 RCC2P2-201ENST00000422174 918 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 CBX1P1-201ENST00000440184 427 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 CYCSP42-201ENST00000450823 238 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 AC116533.1-201ENST00000459748 321 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 RPS29P19-201ENST00000479709 171 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 AC025674.1-201ENST00000507074 324 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 RNA5SP49-201ENST00000516450 115 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 NPM1P52-201ENST00000518264 846 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 AC008676.3-201ENST00000521237 435 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 AC008745.1-201ENST00000604064 271 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 MIR432-201ENST00000606207 94 ntBASIC4.71□□□□□ -1.66
CCDC65Q8IXS2 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms