Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AC012618.3-205ENST00000637896 1496 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 MTND4P26-201ENST00000415971 1359 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 RNU1-14P-201ENST00000362759 152 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 CYB5AP4-201ENST00000396692 399 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 LAP3P1-201ENST00000403648 294 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 RN7SKP235-201ENST00000410662 305 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 P2RY10P2-201ENST00000416730 913 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 RPA2P2-201ENST00000419698 796 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 CNOT7P1-201ENST00000429006 852 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 Z95152.1-201ENST00000453556 656 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 RPL23AP24-201ENST00000458203 385 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 RPS20P4-201ENST00000461659 355 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 S100A11P1-201ENST00000477525 312 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 RPL35P6-201ENST00000490024 372 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 IGHV3-63-201ENST00000518422 341 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AC109635.6-201ENST00000525487 1113 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 FAM106CP-201ENST00000582212 507 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AC015813.4-201ENST00000610469 179 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 FAM27D1-201ENST00000612308 341 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AL354950.1-201ENST00000614150 568 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AL356274.1-201ENST00000617064 410 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AP003497.2-201ENST00000624220 967 ntBASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CDKL3Q8IVW4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 OR10AB1P-202ENST00000641219 1686 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 AL158163.1-201ENST00000603915 1649 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 RNA5SP502-201ENST00000362694 119 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 MIR93-201ENST00000385024 80 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 AP000357.1-201ENST00000409926 1165 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 RNA5SP104-201ENST00000410989 118 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 RPL23AP46-201ENST00000438548 490 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 RNA5SP519-201ENST00000516480 119 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 NPM1P52-201ENST00000518264 846 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 OR8X1P-201ENST00000534542 869 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 AC137768.1-201ENST00000549998 553 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 AC005191.1-201ENST00000603950 358 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 AC134882.1-201ENST00000603738 1676 ntBASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDKL3Q8IVW4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 RNA5SP447-201ENST00000363749 119 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 SNORD74.4-201ENST00000364129 80 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 RPS29P17-201ENST00000430795 166 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 RPS3AP54-201ENST00000435535 734 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 ELOCP8-201ENST00000439309 332 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 AC069285.2-201ENST00000440210 275 ntBASIC4.31□□□□□ -1.72
CDKL3Q8IVW4 ELOCP15-201ENST00000442090 332 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms