Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SCXQ7RTU7 Z85994.2-201ENST00000434327 452 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 NMNAT1P2-201ENST00000435192 860 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 RPS23P7-201ENST00000466210 444 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SCXQ7RTU7 RNU6-709P-201ENST00000517257 104 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 AC026688.1-201ENST00000520639 1168 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SCXQ7RTU7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SCXQ7RTU7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 AC007424.1-203ENST00000554613 687 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 AC087477.6-201ENST00000559595 843 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 MIR4277-201ENST00000578298 84 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 MIR5699-201ENST00000578903 90 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 AC067852.4-201ENST00000590314 478 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 RPL12P25-202ENST00000598100 674 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 AL359757.1-201ENST00000623176 255 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 AC019080.5-201ENST00000624891 757 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 AC016588.2-201ENST00000632484 3021 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SCXQ7RTU7 USP9YP4-201ENST00000424401 1745 ntBASIC3.01□□□□□ -1.93
SCXQ7RTU7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SCXQ7RTU7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SCXQ7RTU7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SCXQ7RTU7 MTND4P26-201ENST00000415971 1359 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3□□□□□ -1.93
SCXQ7RTU7 DDX18P5-201ENST00000534547 1306 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3□□□□□ -1.93
SCXQ7RTU7 RNU1-83P-201ENST00000363426 164 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 SNORA62.2-201ENST00000364672 152 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCXQ7RTU7 RNA5SP372-201ENST00000390836 115 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 RNA5SP397-201ENST00000391323 118 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 AL049693.1-201ENST00000402760 611 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 RN7SKP267-201ENST00000410381 285 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3□□□□□ -1.93
SCXQ7RTU7 RPS27AP7-201ENST00000422792 455 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 EIF4HP2-201ENST00000424380 563 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 RPL23AP1-201ENST00000428990 471 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3□□□□□ -1.93
SCXQ7RTU7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3□□□□□ -1.93
SCXQ7RTU7 TRIM60P9Y-201ENST00000438459 816 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 TRIM60P11Y-201ENST00000445313 801 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3□□□□□ -1.93
SCXQ7RTU7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3□□□□□ -1.93
SCXQ7RTU7 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3□□□□□ -1.93
SCXQ7RTU7 SEPT14P1-201ENST00000458703 648 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 AC104629.2-201ENST00000468627 598 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 AC068587.1-201ENST00000483613 781 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
SCXQ7RTU7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3□□□□□ -1.93
SCXQ7RTU7 AC013356.1-201ENST00000489027 564 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 ATG10-AS1-201ENST00000504846 648 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 RNU6-1308P-201ENST00000516817 103 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3□□□□□ -1.93
SCXQ7RTU7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3□□□□□ -1.93
SCXQ7RTU7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3□□□□□ -1.93
SCXQ7RTU7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3□□□□□ -1.93
SCXQ7RTU7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3□□□□□ -1.93
SCXQ7RTU7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3□□□□□ -1.93
SCXQ7RTU7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3□□□□□ -1.93
SCXQ7RTU7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3□□□□□ -1.93
SCXQ7RTU7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3□□□□□ -1.93
SCXQ7RTU7 CBX3P5-201ENST00000552017 521 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 RPL21P7-201ENST00000557463 483 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3□□□□□ -1.93
SCXQ7RTU7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3□□□□□ -1.93
SCXQ7RTU7 AP001180.3-201ENST00000582221 145 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3□□□□□ -1.93
SCXQ7RTU7 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3□□□□□ -1.93
SCXQ7RTU7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3□□□□□ -1.93
SCXQ7RTU7 AC010680.4-201ENST00000605334 543 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3□□□□□ -1.93
SCXQ7RTU7 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3□□□□□ -1.93
SCXQ7RTU7 AC006338.2-201ENST00000616864 791 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 AC015804.1-201ENST00000622935 435 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3□□□□□ -1.93
SCXQ7RTU7 KPNA2P2-201ENST00000419546 1489 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3□□□□□ -1.93
SCXQ7RTU7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
SCXQ7RTU7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms