Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 MTCYBP12-201ENST00000440559 1134 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 RPS6P2-201ENST00000454208 705 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AURKAPS2-201ENST00000454983 333 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 RPL23AP56-201ENST00000460778 453 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC135279.1-201ENST00000543493 504 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC015688.2-201ENST00000584523 262 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC104687.2-201ENST00000604442 342 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC245008.1-201ENST00000608123 476 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AL121890.3-201ENST00000618494 516 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC073569.3-201ENST00000619055 682 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 MTCO1P18-201ENST00000455518 1419 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 SAMMSON-226ENST00000642089 1582 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 AC133552.1-201ENST00000569988 4007 ntBASIC5.19□□□□□ -1.58
VSTM1Q6UX27 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.19□□□□□ -1.58
VSTM1Q6UX27 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 SALL4P2-201ENST00000423288 2910 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AC008079.2-201ENST00000623543 20396 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 OR5H2-201ENST00000355273 945 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 RNU6-1214P-201ENST00000363650 109 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AL136310.1-201ENST00000404926 654 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AC114755.2-201ENST00000413520 361 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AL008987.1-201ENST00000415528 237 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 FO393419.3-201ENST00000428741 282 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AC084290.1-201ENST00000434995 374 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 EEF1A1P39-201ENST00000440791 250 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 Z80107.2-201ENST00000445127 392 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AL031584.1-201ENST00000447169 754 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AC098583.1-201ENST00000480875 255 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AC010486.3-201ENST00000511602 785 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 RN7SKP34-201ENST00000516142 244 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 Y_RNA.688-201ENST00000516565 95 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 Y_RNA.719-201ENST00000517156 106 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AC005868.1-201ENST00000536421 331 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AC091042.1-201ENST00000579213 173 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AL512782.1-201ENST00000603093 364 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AC104785.1-201ENST00000603220 588 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AC018618.2-201ENST00000604770 446 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AC007349.4-201ENST00000608114 532 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AL451049.1-201ENST00000608672 497 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 AC010435.1-201ENST00000623353 1177 ntBASIC5.18□□□□□ -1.58
VSTM1Q6UX27 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VSTM1Q6UX27 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms